Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq24 183 9e-41 seq68 152 2e-31 seq157 96.9 1e-14 >seq24 Length=1627699 Score = 183 bits (202), Expect = 9e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || ||||| || ||||| || ||||| Sbjct 1128759 CATACCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 1128700 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| || || |||||||||||||| |||||||||||||| || Sbjct 1128699 AGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGATCGGG 1128640 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || ||||||||||| || | || || || || || | || |||| ||| Sbjct 1128639 AGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTC 1128580 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || |||| ||||| || || || || || || ||||||||||| Sbjct 1128579 AACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 1128529 Score = 127 bits (140), Expect = 6e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | |||||||| ||||| || || || || |||||||| ||||| Sbjct 1128221 CATACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATC 1128162 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | ||||| || || ||||| || |||||||| || || || || || || || || Sbjct 1128161 AGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGG 1128102 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || ||||| || || | |||||| | || Sbjct 1128101 GGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTC 1128042 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTT 140721 || || || || | ||||| ||||| | | ||| Sbjct 1128041 GACCTCGAGGGTGATGGTCTTGCCGGTGACTATTT 1128007 Score = 107 bits (118), Expect = 6e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| || || ||||| || || ||||| || || Sbjct 1128531 CATACCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTC 1128472 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || || || || || | ||||| || ||||| Sbjct 1128471 GGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGG 1128412 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | || ||||| || || | || || | || Sbjct 1128411 AGGAATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTC 1128352 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| || || || | ||||| ||||| || || || || Sbjct 1128351 AACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 1128313 >seq68 Length=974473 Score = 152 bits (168), Expect = 2e-31 Identities = 460/708 (65%), Gaps = 2/708 (0%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || || || || || ||||| || || ||| | |||||| || || || || || Sbjct 492965 GCCGTCATCACCGTCCCCGCCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGACGCC 493024 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || |||||||| || || || || Sbjct 493025 GGTCTCATTGCCGGTCTCAACGTCCTCCGTATCATCAACGAACCCACCGCCGCTGCCATC 493084 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || || || || | | || || || | || ||||| ||| | ||| Sbjct 493085 GCCTACGGCCTCGACAAGAAGCACGAGGGTGAGCGCAACGTCCTCATTTTCGATCTTGGT 493144 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || || |||| || || || ||||| || || || Sbjct 493145 GGTGGTACTTTCGATGTCTCCCTCCTCACCATTGAGGATGGCATCTTTGAGGTCAAGGCT 493204 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || |||||||| || || |||||||| |||||| | || || || || || ||| || Sbjct 493205 ACCGCTGGTGACACTCACCTTGGTGGTGAAGATATGGACAACCGCCTGGTGCAGCACTTC 493264 Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 | || || || ||||| ||||| || | ||| || || | | || | || Sbjct 493265 ATCAACGAGTTCAAGCG-CAAGCACAAGAAGGATCTTTCTTCCAACGCCCGTGCGCTCCG 493323 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 ||||| | || || ||||| ||||| ||||| || | || || || |||| ||||| Sbjct 493324 CCGCCTCCGCACCGCTTGTGAGCGTGCCAAGCGAACCCTCTCTTCGTCTGCCCAGACCTC 493383 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 || || || || ||||| || |||| ||||||| | || || || ||||| || Sbjct 493384 CATCGAGATCGACTCTCTCTTCGAGGGCATCGATTTCTACACCTCCATCACCCGTGCCCG 493443 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148 || || || | || ||| || || || | || | | || || || || | Sbjct 493444 TTTCGAGGAGCTCTGCCAGGACCTCTTCCGATCCACCCTTCAGCCCGTCGACCGCGTCCT 493503 Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208 || || || || ||| ||| | | || | || | || ||||| || || Sbjct 493504 CGCCGACGCCAAGATCGACAAGTCCCAGGTCCACGACATCGTCCTCGTCGGTGGCTCCAC 493563 Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAG 350268 ||||| || || || || | | || || | || || ||||| ||||| | Sbjct 493564 CCGTATCCCCCGTGTCCAGAAGCTCATCTCGGACTACTTCAACGGCAAGGAACCCAACAA 493623 Query 350269 ATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 || || || || ||||| |||||||| || |||||||| || ||||| Sbjct 493624 GTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGC 493671 >seq157 Length=2942471 Score = 96.9 bits (106), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 ||||| ||||| |||||| ||| || || | ||||||||||| ||||| || || Sbjct 2817127 CGTGGAACACCCAATGTAACGTTC---TTGGACGATACACCAGCAAAATGGAACGTGTTG 2817183 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||||| | ||||||||||| ||||| ||||| | ||| ||||||||||| Sbjct 2817184 AGCGTCATCTGAGTGGCAGGCTCACCAATGGACTGGGCTGCCAAAACACCAACCATTTCG 2817243 Query 377578 CCAGGATTGACAATAGCCT 377596 ||||| || || | |||| Sbjct 2817244 CCAGGGTTCACGAACGCCT 2817262 Score = 86.0 bits (94), Expect = 2e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 378250 GTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCA 378309 || |||||||||||||| || | ||| | | |||| |||| || |||||||| || ||| Sbjct 2817940 GTCTTAACTGCAGTATCGATGAGACCTTCTCTACCAGCCATGGCGTGGAAGAAGAACTCA 2817999 Query 378310 GTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCA 378369 || || ||||| |||| | | || |||| | || || | ||| | || || | | Sbjct 2818000 GTTGGCGTAAGACCACGGAGGTAAGAGTTCTCGACGAACCCACGTGCCTCGGGGGAGTAA 2818059 Query 378370 TCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCA 378429 |||| || || |||| |||| || || | || || || | ||||| || ||||| Sbjct 2818060 TCATCCTTGGTGAAATGGGGTAGCGTTCGGTACTTGAATCCGAAAGGAATACGCTTTCCT 2818119 Query 378430 TCAACATTCTGTTGACC 378446 || ||| |||| || || Sbjct 2818120 TCGACAATCTGCTGGCC 2818136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515250303604433