Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq24 183 9e-41
seq68 152 2e-31
seq157 96.9 1e-14
>seq24
Length=1627699
Score = 183 bits (202), Expect = 9e-41
Identities = 179/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || ||||| || ||||| || ||||| || |||||
Sbjct 1128759 CATACCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 1128700
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || |||||||| || || |||||||||||||| |||||||||||||| ||
Sbjct 1128699 AGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGATCGGG 1128640
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || ||||||||||| || | || || || || || | || |||| |||
Sbjct 1128639 AGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTC 1128580
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||||| || |||| ||||| || || || || || || |||||||||||
Sbjct 1128579 AACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 1128529
Score = 127 bits (140), Expect = 6e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | |||||||| ||||| || || || || |||||||| |||||
Sbjct 1128221 CATACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATC 1128162
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | ||||| || || ||||| || |||||||| || || || || || || || ||
Sbjct 1128161 AGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGG 1128102
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || ||||| || || | || ||||| || || | |||||| | ||
Sbjct 1128101 GGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTC 1128042
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTT 140721
|| || || || | ||||| ||||| | | |||
Sbjct 1128041 GACCTCGAGGGTGATGGTCTTGCCGGTGACTATTT 1128007
Score = 107 bits (118), Expect = 6e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || ||||| || || ||||| || || ||||| || ||
Sbjct 1128531 CATACCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTC 1128472
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || || || || || || || || | ||||| || |||||
Sbjct 1128471 GGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGG 1128412
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| || || || ||||| || || | || ||||| || || | || || | ||
Sbjct 1128411 AGGAATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTC 1128352
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
||| || || || | ||||| ||||| || || || ||
Sbjct 1128351 AACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 1128313
>seq68
Length=974473
Score = 152 bits (168), Expect = 2e-31
Identities = 460/708 (65%), Gaps = 2/708 (0%)
Strand=Plus/Plus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
|| || || || || || ||||| || || ||| | |||||| || || || || ||
Sbjct 492965 GCCGTCATCACCGTCCCCGCCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGACGCC 493024
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
|| |||||| || | || || || | || || || |||||||| || || || ||
Sbjct 493025 GGTCTCATTGCCGGTCTCAACGTCCTCCGTATCATCAACGAACCCACCGCCGCTGCCATC 493084
Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789
|| || || || || || | | || || || | || ||||| ||| | |||
Sbjct 493085 GCCTACGGCCTCGACAAGAAGCACGAGGGTGAGCGCAACGTCCTCATTTTCGATCTTGGT 493144
Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849
||||||||||| ||||| || || || || |||| || || || ||||| || || ||
Sbjct 493145 GGTGGTACTTTCGATGTCTCCCTCCTCACCATTGAGGATGGCATCTTTGAGGTCAAGGCT 493204
Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909
|| |||||||| || || |||||||| |||||| | || || || || || ||| ||
Sbjct 493205 ACCGCTGGTGACACTCACCTTGGTGGTGAAGATATGGACAACCGCCTGGTGCAGCACTTC 493264
Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968
| || || || ||||| ||||| || | ||| || || | | || | ||
Sbjct 493265 ATCAACGAGTTCAAGCG-CAAGCACAAGAAGGATCTTTCTTCCAACGCCCGTGCGCTCCG 493323
Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028
||||| | || || ||||| ||||| ||||| || | || || || |||| |||||
Sbjct 493324 CCGCCTCCGCACCGCTTGTGAGCGTGCCAAGCGAACCCTCTCTTCGTCTGCCCAGACCTC 493383
Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088
|| || || || ||||| || |||| ||||||| | || || || ||||| ||
Sbjct 493384 CATCGAGATCGACTCTCTCTTCGAGGGCATCGATTTCTACACCTCCATCACCCGTGCCCG 493443
Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148
|| || || | || ||| || || || | || | | || || || || |
Sbjct 493444 TTTCGAGGAGCTCTGCCAGGACCTCTTCCGATCCACCCTTCAGCCCGTCGACCGCGTCCT 493503
Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208
|| || || || ||| ||| | | || | || | || ||||| || ||
Sbjct 493504 CGCCGACGCCAAGATCGACAAGTCCCAGGTCCACGACATCGTCCTCGTCGGTGGCTCCAC 493563
Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAG 350268
||||| || || || || | | || || | || || ||||| ||||| |
Sbjct 493564 CCGTATCCCCCGTGTCCAGAAGCTCATCTCGGACTACTTCAACGGCAAGGAACCCAACAA 493623
Query 350269 ATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316
|| || || || ||||| |||||||| || |||||||| || |||||
Sbjct 493624 GTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGC 493671
>seq157
Length=2942471
Score = 96.9 bits (106), Expect = 1e-14
Identities = 105/139 (76%), Gaps = 3/139 (2%)
Strand=Plus/Plus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
||||| ||||| |||||| ||| || || | ||||||||||| ||||| || ||
Sbjct 2817127 CGTGGAACACCCAATGTAACGTTC---TTGGACGATACACCAGCAAAATGGAACGTGTTG 2817183
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | ||||| | ||||||||||| ||||| ||||| | ||| |||||||||||
Sbjct 2817184 AGCGTCATCTGAGTGGCAGGCTCACCAATGGACTGGGCTGCCAAAACACCAACCATTTCG 2817243
Query 377578 CCAGGATTGACAATAGCCT 377596
||||| || || | ||||
Sbjct 2817244 CCAGGGTTCACGAACGCCT 2817262
Score = 86.0 bits (94), Expect = 2e-11
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 378250 GTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCA 378309
|| |||||||||||||| || | ||| | | |||| |||| || |||||||| || |||
Sbjct 2817940 GTCTTAACTGCAGTATCGATGAGACCTTCTCTACCAGCCATGGCGTGGAAGAAGAACTCA 2817999
Query 378310 GTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCA 378369
|| || ||||| |||| | | || |||| | || || | ||| | || || | |
Sbjct 2818000 GTTGGCGTAAGACCACGGAGGTAAGAGTTCTCGACGAACCCACGTGCCTCGGGGGAGTAA 2818059
Query 378370 TCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCA 378429
|||| || || |||| |||| || || | || || || | ||||| || |||||
Sbjct 2818060 TCATCCTTGGTGAAATGGGGTAGCGTTCGGTACTTGAATCCGAAAGGAATACGCTTTCCT 2818119
Query 378430 TCAACATTCTGTTGACC 378446
|| ||| |||| || ||
Sbjct 2818120 TCGACAATCTGCTGGCC 2818136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515250303604433
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |