Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq68 178 1e-39 seq190 89.7 6e-13 seq135 84.2 2e-11 >seq68 Length=974473 Score = 178 bits (196), Expect = 1e-39 Identities = 396/590 (67%), Gaps = 6/590 (1%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| |||||| | ||||| || || ||| |||||| |||||||||| | Sbjct 866013 ATGCGTGTCGCCGTCGGTATTTGGGGCGATGACGTTGAGCGTGTGATTGAGACGTACAAT 865954 Query 53255 TTAATGA-GCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313 ||||| | | ||| | ||| || || || | || || || || ||||| || || Sbjct 865953 CTAATGTCGTCCAAATT-CTTCACTCATGCTTCACCCACTCTCTTTAACGCCGGCACCCC 865895 Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373 ||| | ||| |||| |||||||| || | ||||||||||| || || || || Sbjct 865894 TCAAGCCCAGCTGTCTTCATGCTTCCTCGTCGACATGAAGGATGATAGTATTGAGGGAAT 865835 Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCA 53433 || || ||| | ||| || || ||||| || | | ||||| ||||| || | Sbjct 865834 TTATGACACGTTGAAGACATGCGCAATGATCTCAAAAATGGCCGGTGGCATCGGCCTCAA 865775 Query 53434 CTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491 | | ||| | | || || | ||| || || |||||| || || || | Sbjct 865774 CATCCATCGCA--TTCGCGCTACAGGCTCATATATTGCGGGGACAAATGGAACATCCAAC 865717 Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || || | || ||||| || |||||||||||||| ||| ||||||| |||| |||||| Sbjct 865716 GGCATTATTCCCATGCTTCGTGTCTTCAACAACACCGCCAGGTACGTTGACCAAGGTGGT 865657 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 |||||| ||| | || ||||||||||| || || |||||||| || | | ||| Sbjct 865656 AATAAGCGCCCGGGAGCCTTTGCCATCTACCTTGAACCATGGCACGCAGATGTATTCGAG 865597 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACA 53671 || | || || || ||| || || | |||||| | || ||| || || || Sbjct 865596 TTCTTGGACCTTCGCAAGAACCACGGCAAAGAAGAGGTTCGAGCCCGGGATCTCTTCCTC 865537 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || |||||||| || || |||||| | || || ||| ||| || ||| |||| Sbjct 865536 GCGCTCTGGATTCCCGATCTTTTCATGAAGCGAGTTGAAAAGAACGGCGACTGGACCCTG 865477 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 |||||||| ||||| ||||||||||| | | ||| ||||||||||| Sbjct 865476 ATGTGCCCCAACGAATGCCCCGGCCTTGCCGATTGCTATGGTGAGGAGTT 865427 >seq190 Length=2042575 Score = 89.7 bits (98), Expect = 6e-13 Identities = 95/124 (77%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 ||||| || || | ||| ||||||||||| || |||||||| | ||| || |||| | Sbjct 1615575 TCATTGGAGAAGGTAAGACCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAAATGGAGGCG 1615516 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 |||| ||| ||||||||||| || ||||| || ||||| || ||||| || ||||| Sbjct 1615515 AAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGGCGCTGAGCGAA- 1615457 Query 74910 GGTG 74913 |||| Sbjct 1615456 GGTG 1615453 >seq135 Length=3471471 Score = 84.2 bits (92), Expect = 2e-11 Identities = 233/346 (67%), Gaps = 10/346 (3%) Strand=Plus/Plus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| || | ||||||||||| ||||| ||||| || | ||||||||| || Sbjct 571878 GTTGATGAGAAGACCCTTGATGTGACTCCCGTCGTGATCCTGATCCGCCATGATCATAAG 571937 Query 152829 ACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTTGAAGCCCGAGGA 152887 | ||||||| || | | | | | || | ||| || | | ||||| | ||||||| Sbjct 571938 ATGACCGTAACGGA-GCCCCTTGGTATCGGTGTAAACATGTTTATGTTTCAAACCGAGGA 571996 Query 152888 TCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAA 152947 || |||| ||| || |||| || | ||| | ||| | | || ||||| |||| Sbjct 571997 ACTGCTTGATGTTCTGAATCTCCTGGTTCTTGGTAATCTGATCTATCGATGCATCTCGAA 572056 Query 152948 CATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGA-ACGCGTTGCGGCCTACAA-CGCT 153005 | ||| || |||||| ||||| || || || |||| ||| || | | | | || ||| Sbjct 572057 CGTTGAGCATCTTTCCTCGGAGCGGGAAGACTCCGATACG-GTCGGGATCGAGAATTGCT 572115 Query 153006 CAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTC 153065 | | || || || || | || |||||||||||||| |||| || | || || | Sbjct 572116 C-GTCCTGCGATGGCCAAACTCTTGGCCGAGTCACCCTCAGTGAGGATCAAAGTGCACTG 572174 Query 153066 GTGAGACCG--ATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109 || || ||| | || || ||| ||||||| ||| ||||||||| Sbjct 572175 GT-AG-CCGTTCTTGGTTCCCGCCAAGTTGGCATCGACAAGCTTGG 572218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214556717800