Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq68 178 1e-39
seq190 89.7 6e-13
seq135 84.2 2e-11
>seq68
Length=974473
Score = 178 bits (196), Expect = 1e-39
Identities = 396/590 (67%), Gaps = 6/590 (1%)
Strand=Plus/Minus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254
||||| |||||| | ||||| || || ||| |||||| |||||||||| |
Sbjct 866013 ATGCGTGTCGCCGTCGGTATTTGGGGCGATGACGTTGAGCGTGTGATTGAGACGTACAAT 865954
Query 53255 TTAATGA-GCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313
||||| | | ||| | ||| || || || | || || || || ||||| || ||
Sbjct 865953 CTAATGTCGTCCAAATT-CTTCACTCATGCTTCACCCACTCTCTTTAACGCCGGCACCCC 865895
Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373
||| | ||| |||| |||||||| || | ||||||||||| || || || ||
Sbjct 865894 TCAAGCCCAGCTGTCTTCATGCTTCCTCGTCGACATGAAGGATGATAGTATTGAGGGAAT 865835
Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCA 53433
|| || ||| | ||| || || ||||| || | | ||||| ||||| || |
Sbjct 865834 TTATGACACGTTGAAGACATGCGCAATGATCTCAAAAATGGCCGGTGGCATCGGCCTCAA 865775
Query 53434 CTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491
| | ||| | | || || | ||| || || |||||| || || || |
Sbjct 865774 CATCCATCGCA--TTCGCGCTACAGGCTCATATATTGCGGGGACAAATGGAACATCCAAC 865717
Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551
|| || | || ||||| || |||||||||||||| ||| ||||||| |||| ||||||
Sbjct 865716 GGCATTATTCCCATGCTTCGTGTCTTCAACAACACCGCCAGGTACGTTGACCAAGGTGGT 865657
Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611
|||||| ||| | || ||||||||||| || || |||||||| || | | |||
Sbjct 865656 AATAAGCGCCCGGGAGCCTTTGCCATCTACCTTGAACCATGGCACGCAGATGTATTCGAG 865597
Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACA 53671
|| | || || || ||| || || | |||||| | || ||| || || ||
Sbjct 865596 TTCTTGGACCTTCGCAAGAACCACGGCAAAGAAGAGGTTCGAGCCCGGGATCTCTTCCTC 865537
Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731
|| || |||||||| || || |||||| | || || ||| ||| || ||| ||||
Sbjct 865536 GCGCTCTGGATTCCCGATCTTTTCATGAAGCGAGTTGAAAAGAACGGCGACTGGACCCTG 865477
Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781
|||||||| ||||| ||||||||||| | | ||| |||||||||||
Sbjct 865476 ATGTGCCCCAACGAATGCCCCGGCCTTGCCGATTGCTATGGTGAGGAGTT 865427
>seq190
Length=2042575
Score = 89.7 bits (98), Expect = 6e-13
Identities = 95/124 (77%), Gaps = 1/124 (1%)
Strand=Plus/Minus
Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849
||||| || || | ||| ||||||||||| || |||||||| | ||| || |||| |
Sbjct 1615575 TCATTGGAGAAGGTAAGACCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAAATGGAGGCG 1615516
Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909
|||| ||| ||||||||||| || ||||| || ||||| || ||||| || |||||
Sbjct 1615515 AAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGGCGCTGAGCGAA- 1615457
Query 74910 GGTG 74913
||||
Sbjct 1615456 GGTG 1615453
>seq135
Length=3471471
Score = 84.2 bits (92), Expect = 2e-11
Identities = 233/346 (67%), Gaps = 10/346 (3%)
Strand=Plus/Plus
Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828
||||| || | ||||||||||| ||||| ||||| || | ||||||||| ||
Sbjct 571878 GTTGATGAGAAGACCCTTGATGTGACTCCCGTCGTGATCCTGATCCGCCATGATCATAAG 571937
Query 152829 ACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTTGAAGCCCGAGGA 152887
| ||||||| || | | | | | || | ||| || | | ||||| | |||||||
Sbjct 571938 ATGACCGTAACGGA-GCCCCTTGGTATCGGTGTAAACATGTTTATGTTTCAAACCGAGGA 571996
Query 152888 TCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAA 152947
|| |||| ||| || |||| || | ||| | ||| | | || ||||| ||||
Sbjct 571997 ACTGCTTGATGTTCTGAATCTCCTGGTTCTTGGTAATCTGATCTATCGATGCATCTCGAA 572056
Query 152948 CATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGA-ACGCGTTGCGGCCTACAA-CGCT 153005
| ||| || |||||| ||||| || || || |||| ||| || | | | | || |||
Sbjct 572057 CGTTGAGCATCTTTCCTCGGAGCGGGAAGACTCCGATACG-GTCGGGATCGAGAATTGCT 572115
Query 153006 CAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTC 153065
| | || || || || | || |||||||||||||| |||| || | || || |
Sbjct 572116 C-GTCCTGCGATGGCCAAACTCTTGGCCGAGTCACCCTCAGTGAGGATCAAAGTGCACTG 572174
Query 153066 GTGAGACCG--ATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109
|| || ||| | || || ||| ||||||| ||| |||||||||
Sbjct 572175 GT-AG-CCGTTCTTGGTTCCCGCCAAGTTGGCATCGACAAGCTTGG 572218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214556717800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |