Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq24 203 4e-47
seq68 174 2e-38
seq46 152 6e-32
seq146 132 5e-26
seq190 93.3 5e-14
>seq24
Length=1627699
Score = 203 bits (224), Expect = 4e-47
Identities = 183/230 (80%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| |||||||||||||| ||||| || || ||||||||
Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| ||||| | || ||||||||||||||||||||||| || || |||
Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 1128876
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| |||||||| || ||||| || ||||| | ||| || || | || || |||
Sbjct 1128877 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 1128936
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| ||||| || || || ||| | || ||||| ||||| ||
Sbjct 1128937 ATCCAGAAGGAGTCCACGCTCCACCTCGTCCTCCGCCTTCGTGGTGGCCA 1128986
Score = 172 bits (190), Expect = 6e-38
Identities = 167/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| |||||||||||||| || || || ||||||||||| || | ||| |
Sbjct 1128313 GTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGAC 1128372
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | ||| | || || |||||||||||||| |||||||| ||||| || || | |||
Sbjct 1128373 AATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATT 1128432
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| || || ||||| |||||||||| || ||||| | ||||| ||| |||| |||||
Sbjct 1128433 TTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAG 1128492
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||| || ||||| ||| | ||||| || |||||
Sbjct 1128493 TCCACGCTCCATCTGGTCCTCCGTCTCCGTGGTGG 1128527
Score = 145 bits (160), Expect = 9e-30
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || || ||||| ||||| ||||| ||| | ||| | ||| |
Sbjct 1128015 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 1128074
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| || || || ||||| ||||| || ||||| ||||| |||
Sbjct 1128075 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAAAG 1128134
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||| | || ||||| | || || ||| | || ||||||||||| |||||
Sbjct 1128135 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTCAC 1128194
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| || | || ||||| |||||
Sbjct 1128195 CTTGTTCTCCGCCTTCGTGGTGG 1128217
>seq68
Length=974473
Score = 174 bits (192), Expect = 2e-38
Identities = 876/1380 (63%), Gaps = 38/1380 (3%)
Strand=Plus/Plus
Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454
||||| || ||||| |||||||| ||||| || |||| ||||| || || |||||
Sbjct 864662 GTGTATGGTTCAAAGCATTCGTTGTTCCCGAGAATTTGAGAGGTGCTTGCAGTGGGCATG 864721
Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGAC 80514
||| | | ||| || || || | ||| |||| |||||| | ||| || | | |
Sbjct 864722 GGGGCCAACAAAAGGCTGTTACGGACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATCC 864781
Query 80515 CAAAAATCAAC----CCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCC 80568
|| || || || | ||| |||| ||||||||||| ||| | || || |
Sbjct 864782 CAGT--TCCACAAGTCCGAGGGCT-TGACATTCCACATGTCGTACTGGAGAATTCCTTGA 864838
Query 80569 GACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGAC 80628
|| | ||||| ||| || ||||| || ||||||| | |||||| | ||| |||
Sbjct 864839 GAGACGGGAGAACCCTCGTACGTCGAATAGGGGCCCTGCTCCTTGGCGATCTCCATTGAC 864898
Query 80629 TCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGT 80688
| || || ||||| || || ||| |||| | || | || ||||
Sbjct 864899 GCTTCCAGAGCGGCGTGGTAGATTGTCTCGAAGATTTGAATATTGAGCTGCCGGGCCTCG 864958
Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748
||| ||||| | || | || | ||| | || |||| || || || || |
Sbjct 864959 GGGGATTCGAAGGGCATACGCAGGGCAAGGAAGGCATCCGCCAATCCTTGCACACCCACA 865018
Query 80749 GCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATT 80807
| || || ||||||||| | || | | || ||||||| | | ||||| | ||
Sbjct 865019 CCAATGGGCCGGTGGCGCATATTGCTGTTGCG-GGCCTCCTGCACCGGGTAGTAATTGAC 865077
Query 80808 ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAA 80867
||| |||| || || || || || ||| || || || || ||||||| |||
Sbjct 865078 ATCAATGATCTTATTGAGATTTCGAACGACGACCTTGGTTACTTCGTGGAGTTTCTCAAA 865137
Query 80868 GTCGAATTGGTTCCCCT-------TC-ACAAATGCCGG-AAGGCTCAGGGACGCCAGATT 80918
|||| | | | ||| | || || || | || ||||| || || |||| ||
Sbjct 865138 GTCGTACTCG--CCCTTGTTGTAGTCGACGAACGAGGGCAAGGCA-AGCGATGCCAAGTT 865194
Query 80919 GCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGA 80978
||| || ||||| || || | | | | |||||| ||| || ||||| | ||| ||
Sbjct 865195 GCAAACCGCCACTTCATCCGGAGCCGAGTACTCGATGATCTCGGTGCAGAGATTGGAGCT 865254
Query 80979 CTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACAT 81038
|| || || ||||| || ||||| |||| |||||| ||||||||| |||
Sbjct 865255 GCGGATAGTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCAT 865314
Query 81039 GTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTT 81098
| | || | || || ||| ||| | || | |||||||| ||| | || | |||||
Sbjct 865315 GAAAGGATTTCCTGTTTCGGTCTGAGCCTCCAAGATGGCGTACCAGAGCTTTTGAGCCTT 865374
Query 81099 GACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGC 81158
|| |||||| |||||| | ||||||| | || | ||||||| |
Sbjct 865375 GAGAGTCTTGCGACCGCGGCCTTCCTTCTCATACTTTTCATACAAGGCCTCGAACTCCTC 865434
Query 81159 ACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTC 81218
||| | || | ||| | ||||| ||||| |||||||||||| ||||||| ||
Sbjct 865435 ACCATAGCAATCGGCAAGGCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTT 865494
Query 81219 GTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCA 81278
|| || || |||||||||| || || |||||||| ||| ||| || || |||
Sbjct 865495 CTTTTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGC 865554
Query 81279 GCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATG 81338
|| |||| || | || ||||| ||| | || | || || | | || || ||
Sbjct 865555 TCGAACCTCTTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCGAATACATCTGCGTG 865614
Query 81339 CCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395
|||||| || || || | ||| | | ||| ||| | ||||| |||| |||||
Sbjct 865615 CCATGGTTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGTA 865674
Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455
| ||| || ||| || ||||| | ||| || || || || | || || || ||
Sbjct 865675 CCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGATGTTCCATTTGT 865734
Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGA----AAGACCGATGCCAC 81511
||| | ||| || || | ||||| | ||| ||| || || ||||||||||
Sbjct 865735 CCCCGCAATATATGAGCCTGTAGCGCGAA---TGC-GATGGATGTTGAGGCCGATGCCAC 865790
Query 81512 CTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTAT 81571
| | | ||||| ||| || || |||| || |||||||||||||| || ||||
Sbjct 865791 CGGCCATTTTTGAGATCATTGCGCATGTCTTCAACGTGTCATAAATTCCCTCAATACTAT 865850
Query 81572 CTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTT--TTTGAGCCGGCATT 81629
| | |||||||| | | ||| || |||| || |||||| | |||||| ||
Sbjct 865851 CATCCTTCATGTCGACGAGGAAGCATGAAGACAGCT--GGGCTTGAGGGGTGCCGGCGTT 865908
Query 81630 GAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTT 81689
|| || || || | || ||| |||| | | ||||| || | || || || |
Sbjct 865909 AAAGAGAGTGGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGATTGTACGTCTCAAT 865968
Query 81690 GACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749
|| || || || || || |||||||| || |||||||||| ||||| ||| ||
Sbjct 865969 CACACGCTCAACGTCATCGCCCCAAATACCGACGGCGACACGCATAATCATGTGCTGAGG 866028
>seq46
Length=1231756
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || || |||||||| || || |||||||| |||||
Sbjct 616717 ATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCG 616658
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | || || |||||||||||||| || || || |||||
Sbjct 616657 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAA 616598
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||| | || ||||| | ||||| ||
Sbjct 616597 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTACAAC 616538
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || || ||| | |||||||| || ||
Sbjct 616537 ATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTTCGTGGCGG 616491
>seq146
Length=3337086
Score = 132 bits (146), Expect = 5e-26
Identities = 138/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| || || |||||||| ||||| || | ||
Sbjct 58580 TTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 58639
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| ||||| | || |||||||||||||||||||| ||||| || || ||||||||
Sbjct 58640 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCTT 58699
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
||||| || || ||||| |||||||||| || ||||| | || || ||| | || |||
Sbjct 58700 ATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAAG 58759
Query 27595 G 27595
|
Sbjct 58760 G 58760
>seq190
Length=2042575
Score = 93.3 bits (102), Expect = 5e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 64713 TCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTC 64772
|||||| |||| || || || || || || || ||||| || | ||| ||
Sbjct 1615462 TCAGCGCCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTC 1615521
Query 64773 TATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGAT 64832
||||||||||| || ||||| ||||| ||||| ||||| | || || || ||||| ||
Sbjct 1615522 CATTTTCTGGCTCAAGAAGCGCGGCCTTATGCCTGGTCTTACCTTCTCCAATGAGCTCAT 1615581
Query 64833 CTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGA 64892
||| || |||||||| |||||| || || ||| ||||||| |||||||||| |
Sbjct 1615582 CTCCCGTGACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTCCCACCTCAAGCA 1615641
Query 64893 C 64893
|
Sbjct 1615642 C 1615642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570308895806320
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