Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq24 203 4e-47 seq68 174 2e-38 seq46 152 6e-32 seq146 132 5e-26 seq190 93.3 5e-14 >seq24 Length=1627699 Score = 203 bits (224), Expect = 4e-47 Identities = 183/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| |||||||||||||| ||||| || || |||||||| Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| ||||| | || ||||||||||||||||||||||| || || ||| Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 1128876 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||| || ||||| || ||||| | ||| || || | || || ||| Sbjct 1128877 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 1128936 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||| || || || ||| | || ||||| ||||| || Sbjct 1128937 ATCCAGAAGGAGTCCACGCTCCACCTCGTCCTCCGCCTTCGTGGTGGCCA 1128986 Score = 172 bits (190), Expect = 6e-38 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| |||||||||||||| || || || ||||||||||| || | ||| | Sbjct 1128313 GTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGAC 1128372 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || || |||||||||||||| |||||||| ||||| || || | ||| Sbjct 1128373 AATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATT 1128432 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| |||||||||| || ||||| | ||||| ||| |||| ||||| Sbjct 1128433 TTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAG 1128492 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || ||||| ||| | ||||| || ||||| Sbjct 1128493 TCCACGCTCCATCTGGTCCTCCGTCTCCGTGGTGG 1128527 Score = 145 bits (160), Expect = 9e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||| ||||| ||||| ||| | ||| | ||| | Sbjct 1128015 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 1128074 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || || || ||||| ||||| || ||||| ||||| ||| Sbjct 1128075 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAAAG 1128134 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | || ||||| | || || ||| | || ||||||||||| ||||| Sbjct 1128135 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTCAC 1128194 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || ||||| ||||| Sbjct 1128195 CTTGTTCTCCGCCTTCGTGGTGG 1128217 >seq68 Length=974473 Score = 174 bits (192), Expect = 2e-38 Identities = 876/1380 (63%), Gaps = 38/1380 (3%) Strand=Plus/Plus Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454 ||||| || ||||| |||||||| ||||| || |||| ||||| || || ||||| Sbjct 864662 GTGTATGGTTCAAAGCATTCGTTGTTCCCGAGAATTTGAGAGGTGCTTGCAGTGGGCATG 864721 Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGAC 80514 ||| | | ||| || || || | ||| |||| |||||| | ||| || | | | Sbjct 864722 GGGGCCAACAAAAGGCTGTTACGGACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATCC 864781 Query 80515 CAAAAATCAAC----CCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCC 80568 || || || || | ||| |||| ||||||||||| ||| | || || | Sbjct 864782 CAGT--TCCACAAGTCCGAGGGCT-TGACATTCCACATGTCGTACTGGAGAATTCCTTGA 864838 Query 80569 GACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGAC 80628 || | ||||| ||| || ||||| || ||||||| | |||||| | ||| ||| Sbjct 864839 GAGACGGGAGAACCCTCGTACGTCGAATAGGGGCCCTGCTCCTTGGCGATCTCCATTGAC 864898 Query 80629 TCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGT 80688 | || || ||||| || || ||| |||| | || | || |||| Sbjct 864899 GCTTCCAGAGCGGCGTGGTAGATTGTCTCGAAGATTTGAATATTGAGCTGCCGGGCCTCG 864958 Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748 ||| ||||| | || | || | ||| | || |||| || || || || | Sbjct 864959 GGGGATTCGAAGGGCATACGCAGGGCAAGGAAGGCATCCGCCAATCCTTGCACACCCACA 865018 Query 80749 GCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATT 80807 | || || ||||||||| | || | | || ||||||| | | ||||| | || Sbjct 865019 CCAATGGGCCGGTGGCGCATATTGCTGTTGCG-GGCCTCCTGCACCGGGTAGTAATTGAC 865077 Query 80808 ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAA 80867 ||| |||| || || || || || ||| || || || || ||||||| ||| Sbjct 865078 ATCAATGATCTTATTGAGATTTCGAACGACGACCTTGGTTACTTCGTGGAGTTTCTCAAA 865137 Query 80868 GTCGAATTGGTTCCCCT-------TC-ACAAATGCCGG-AAGGCTCAGGGACGCCAGATT 80918 |||| | | | ||| | || || || | || ||||| || || |||| || Sbjct 865138 GTCGTACTCG--CCCTTGTTGTAGTCGACGAACGAGGGCAAGGCA-AGCGATGCCAAGTT 865194 Query 80919 GCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGA 80978 ||| || ||||| || || | | | | |||||| ||| || ||||| | ||| || Sbjct 865195 GCAAACCGCCACTTCATCCGGAGCCGAGTACTCGATGATCTCGGTGCAGAGATTGGAGCT 865254 Query 80979 CTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACAT 81038 || || || ||||| || ||||| |||| |||||| ||||||||| ||| Sbjct 865255 GCGGATAGTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCAT 865314 Query 81039 GTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTT 81098 | | || | || || ||| ||| | || | |||||||| ||| | || | ||||| Sbjct 865315 GAAAGGATTTCCTGTTTCGGTCTGAGCCTCCAAGATGGCGTACCAGAGCTTTTGAGCCTT 865374 Query 81099 GACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGC 81158 || |||||| |||||| | ||||||| | || | ||||||| | Sbjct 865375 GAGAGTCTTGCGACCGCGGCCTTCCTTCTCATACTTTTCATACAAGGCCTCGAACTCCTC 865434 Query 81159 ACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTC 81218 ||| | || | ||| | ||||| ||||| |||||||||||| ||||||| || Sbjct 865435 ACCATAGCAATCGGCAAGGCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTT 865494 Query 81219 GTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCA 81278 || || || |||||||||| || || |||||||| ||| ||| || || ||| Sbjct 865495 CTTTTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGC 865554 Query 81279 GCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATG 81338 || |||| || | || ||||| ||| | || | || || | | || || || Sbjct 865555 TCGAACCTCTTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCGAATACATCTGCGTG 865614 Query 81339 CCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395 |||||| || || || | ||| | | ||| ||| | ||||| |||| ||||| Sbjct 865615 CCATGGTTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGTA 865674 Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455 | ||| || ||| || ||||| | ||| || || || || | || || || || Sbjct 865675 CCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGATGTTCCATTTGT 865734 Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGA----AAGACCGATGCCAC 81511 ||| | ||| || || | ||||| | ||| ||| || || |||||||||| Sbjct 865735 CCCCGCAATATATGAGCCTGTAGCGCGAA---TGC-GATGGATGTTGAGGCCGATGCCAC 865790 Query 81512 CTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTAT 81571 | | | ||||| ||| || || |||| || |||||||||||||| || |||| Sbjct 865791 CGGCCATTTTTGAGATCATTGCGCATGTCTTCAACGTGTCATAAATTCCCTCAATACTAT 865850 Query 81572 CTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTT--TTTGAGCCGGCATT 81629 | | |||||||| | | ||| || |||| || |||||| | |||||| || Sbjct 865851 CATCCTTCATGTCGACGAGGAAGCATGAAGACAGCT--GGGCTTGAGGGGTGCCGGCGTT 865908 Query 81630 GAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTT 81689 || || || || | || ||| |||| | | ||||| || | || || || | Sbjct 865909 AAAGAGAGTGGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGATTGTACGTCTCAAT 865968 Query 81690 GACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 || || || || || || |||||||| || |||||||||| ||||| ||| || Sbjct 865969 CACACGCTCAACGTCATCGCCCCAAATACCGACGGCGACACGCATAATCATGTGCTGAGG 866028 >seq46 Length=1231756 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| || || |||||||| ||||| Sbjct 616717 ATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCG 616658 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || |||||||||||||| || || || ||||| Sbjct 616657 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAA 616598 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| | ||||| || Sbjct 616597 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTACAAC 616538 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | |||||||| || || Sbjct 616537 ATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTTCGTGGCGG 616491 >seq146 Length=3337086 Score = 132 bits (146), Expect = 5e-26 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| || || |||||||| ||||| || | || Sbjct 58580 TTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 58639 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| ||||| | || |||||||||||||||||||| ||||| || || |||||||| Sbjct 58640 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCTT 58699 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 ||||| || || ||||| |||||||||| || ||||| | || || ||| | || ||| Sbjct 58700 ATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAAG 58759 Query 27595 G 27595 | Sbjct 58760 G 58760 >seq190 Length=2042575 Score = 93.3 bits (102), Expect = 5e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 64713 TCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTC 64772 |||||| |||| || || || || || || || ||||| || | ||| || Sbjct 1615462 TCAGCGCCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTC 1615521 Query 64773 TATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGAT 64832 ||||||||||| || ||||| ||||| ||||| ||||| | || || || ||||| || Sbjct 1615522 CATTTTCTGGCTCAAGAAGCGCGGCCTTATGCCTGGTCTTACCTTCTCCAATGAGCTCAT 1615581 Query 64833 CTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGA 64892 ||| || |||||||| |||||| || || ||| ||||||| |||||||||| | Sbjct 1615582 CTCCCGTGACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTCCCACCTCAAGCA 1615641 Query 64893 C 64893 | Sbjct 1615642 C 1615642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308895806320