Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq24 185 2e-41
seq46 163 7e-35
seq146 138 3e-27
>seq24
Length=1627699
Score = 185 bits (204), Expect = 2e-41
Identities = 168/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| |||||||| || || ||||| ||||| | |||||| | ||||||
Sbjct 1128740 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 1128681
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || || |||||||| ||||| || || ||||| | || ||||| |||
Sbjct 1128680 TCCAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCCTCCTTATCC 1128621
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||||||||| || |||||| ||||| || ||||||
Sbjct 1128620 TGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTC 1128561
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | ||||||
Sbjct 1128560 TTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 1128529
Score = 163 bits (180), Expect = 7e-35
Identities = 156/200 (78%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || || || |||||||| || ||||| || || || | ||||| | |||||
Sbjct 1128512 AGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCC 1128453
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || | ||||||||||||||||||| || |||||||||
Sbjct 1128452 TCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCC 1128393
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||||||||| || ||||||||||| ||||| |||
Sbjct 1128392 TGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTC 1128333
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
|| || || || ||||| ||
Sbjct 1128332 TTGCCGGTAAGGGTCTTGAC 1128313
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| ||||| || |||||||| || ||||| || ||||| | ||| ||
Sbjct 1128978 ACGAAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGT 1128919
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || ||||||||||| || || || || || || || || || |||| |||
Sbjct 1128918 GCGACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCC 1128859
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| ||||| || |||||||| || || ||||| |||||
Sbjct 1128858 CTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCGAG 1128799
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| || || || ||||| ||||| | ||||||
Sbjct 1128798 CGTAATCGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 1128757
Score = 154 bits (170), Expect = 3e-32
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || ||||||||||| ||||| || || || || || ||||| | ||||||
Sbjct 1128212 ACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGT 1128153
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || |||||||| || ||||| || ||||| |||||||| || || | ||
Sbjct 1128152 TCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCC 1128093
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || || || |||||||| |||||| || ||||||||
Sbjct 1128092 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAG 1128033
Query 211073 AGTGATCGTCTTTCCCGTGA 211092
||||| ||||| || ||||
Sbjct 1128032 GGTGATGGTCTTGCCGGTGA 1128013
>seq46
Length=1231756
Score = 163 bits (180), Expect = 7e-35
Identities = 171/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| ||||| || || ||||| || |||||||| || || | |||||
Sbjct 616496 ACGAAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT 616555
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || ||||||||||| |||||||| ||||| |||||||| || || | ||
Sbjct 616556 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCC 616615
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || || || ||||| ||||| ||| || ||||| ||
Sbjct 616616 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAG 616675
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| ||||| ||||| || ||||| || || | ||||| ||
Sbjct 616676 GGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 616720
>seq146
Length=3337086
Score = 138 bits (152), Expect = 3e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| || || || ||||| | |||||| | ||||| || |||||||| || ||||| |||
Sbjct 58758 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 58699
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || ||||| || ||||| | ||| ||||||||||| ||||| ||||| || |||
Sbjct 58698 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 58639
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| ||| || ||||| || ||||| ||||| |||||||| ||||| || ||
Sbjct 58638 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 58580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159148866305015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |