Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq24 102 6e-17 >seq24 Length=1627699 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || || || ||||| || ||||||||||| || | Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || | || | || ||||| || || | || || ||||| Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGA-TTCAGGACAAGGAGGGAATTCCCCCCGATCA 1128875 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||||||||| || || || |||| |||||| | |||||||| Sbjct 1128876 GCAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAA 1128935 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 1128936 TATCCAGAAGGAGTCCAC 1128953 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || || || || ||||| || ||||||||||| || || Sbjct 1128529 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 1128588 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| || || || || | || || ||||| Sbjct 1128589 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGATCAG 1128648 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || || || |||||||| | ||||| | ||||||||| Sbjct 1128649 CAACGTCTTATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCTGATTACAAC 1128708 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 1128709 ATTCAGAAGGAGTCCAC 1128725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008730787188