Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq24 172 1e-37
seq46 156 9e-33
seq146 129 1e-24
seq62 93.3 9e-14
seq190 86.0 1e-11
>seq24
Length=1627699
Score = 172 bits (190), Expect = 1e-37
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||||||| | |||| || || ||||| |||||||| |
Sbjct 1128528 ACCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGA 1128469
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || ||||| || ||||| |||||||||||| ||
Sbjct 1128468 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGG 1128409
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| |||||||| | || || | ||||| ||||| || | || ||
Sbjct 1128408 AATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAAC 1128349
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
||||| ||||| ||||| || || | ||||| ||||
Sbjct 1128348 CTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 1128311
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| || || || |||||||| ||||
Sbjct 1128756 ACCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGA 1128697
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||||||||| || || || || || |||||||| | |||||| || || ||
Sbjct 1128696 AAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGATCGGGAGG 1128637
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||| || || ||||| | || ||| | ||||| |||||||| | ||| ||
Sbjct 1128636 GATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAAC 1128577
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||| || |||||||| || || | |||||| ||||| ||||||||
Sbjct 1128576 TTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 1128529
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| ||||| || || || || | |||| || || ||||| ||||| |||| |
Sbjct 1128983 CCACCACGAAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAA 1128924
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| || ||||| || || || |||||||| || | ||| || || || |||
Sbjct 1128923 AGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGA 1128864
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| || ||||| | || || | ||||| || || |||| || |||
Sbjct 1128863 ATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACT 1128804
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || |||||||| || || | ||||| || || ||||||||
Sbjct 1128803 TCGAGCGTAATCGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 1128757
Score = 125 bits (138), Expect = 1e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || || || | ||| ||| || || || ||||| ||||
Sbjct 1128218 ACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGA 1128159
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || || || || || || |||| || |||||||| ||
Sbjct 1128158 AAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGG 1128099
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || || | ||||| || || || | |||||
Sbjct 1128098 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGAC 1128039
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
||||| ||||| ||||| || ||
Sbjct 1128038 CTCGAGGGTGATGGTCTTGCCGGT 1128015
>seq46
Length=1231756
Score = 156 bits (172), Expect = 9e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || || || || | || || || ||||||||||||||||
Sbjct 616490 ACCGCCACGAAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 616549
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||| ||||||| || |||||||| ||
Sbjct 616550 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGG 616609
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || || | ||||| |||||||| | |||||
Sbjct 616610 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 616669
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||| ||||| ||||| | ||||| ||||| || ||||| ||
Sbjct 616670 CTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 616720
>seq146
Length=3337086
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| || || ||||| |||| ||| |||||||||||||| || || || ||||| || ||
Sbjct 58758 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 58699
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| ||||| || || || ||||||||||| || ||||| | || || | |||
Sbjct 58698 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 58639
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| |||||||| | ||||| || || ||||| ||||||||||| | ||||| |||||
Sbjct 58638 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 58580
>seq62
Length=867
Score = 93.3 bits (102), Expect = 9e-14
Identities = 164/236 (69%), Gaps = 15/236 (6%)
Strand=Plus/Plus
Query 109939 GCAACATCATCAAATTGCGGGAACCCCCTAAAGCATATGATACCAAGGTTGATTGTGAAA 109998
|| ||||| |||||||||||| | | |||||||| | | | ||| | | | ||||
Sbjct 409 GCGACATCCTCAAATTGCGGGGAACTCCTAAAGCTTCCACTCCAAAGCCGGTTCGCGAAA 468
Query 109999 GCATCAGCTGGCCGAG--AACAGAACTCGGGTATGGTAAAAATTCATATGATGCCACAAT 110056
|| | | ||||| | ||||| |||||||| | ||||| | ||||| |||||
Sbjct 469 GCCGCCGGTGGCCAGGTTAACAGC-CTCGGGTACTGGAAAAACGTGGAAGATGCGACAAT 527
Query 110057 GGGCAATCCGCAGCCAAGCCTCTAAAGG--------AAAATTATTCCCATGAGGAAGGTT 110108
|| ||||||||||||||||| ||||||| | | | |||| | ||||||||
Sbjct 528 GGACAATCCGCAGCCAAGCCCCTAAAGGCTCCCAGTAGAGGGACGCCCACGGGGAAGGTT 587
Query 110109 CAACGACTAAACGGTGATGGGTCTGGTGCTTA---GCACAGGCTTAAGATATAGTC 110161
|| |||| ||||| ||||||| | | || | || | |||||||||| ||||
Sbjct 588 CAGAGACTTAACGGGGATGGGTAT-GCGCCGAGAGGCGCCTGCTTAAGATAAAGTC 642
>seq190
Length=2042575
Score = 86.0 bits (94), Expect = 1e-11
Identities = 127/179 (71%), Gaps = 1/179 (1%)
Strand=Plus/Plus
Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286
|||||||||| || | |||||| ||| || || || ||||| || || | | |||
Sbjct 1615734 TCGGCATGAACGCGAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACAGGCTGCTCG 1615793
Query 230287 TGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCA 230346
| || || || | ||||| | || | |||| |||||||||| || |||||| ||
Sbjct 1615794 TCGCCCTCGGAAATGAGAAGATCTACAGGTCCACCAACCCCTTCGACTTCATGGAGAACA 1615853
Query 230347 TTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404
| || ||| || || || ||||||||||| |||||||| | || || || ||||||
Sbjct 1615854 TCTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCC 1615912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046736370205994
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |