Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq24 172 1e-37 seq46 156 9e-33 seq146 129 1e-24 seq62 93.3 9e-14 seq190 86.0 1e-11 >seq24 Length=1627699 Score = 172 bits (190), Expect = 1e-37 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||||||| | |||| || || ||||| |||||||| | Sbjct 1128528 ACCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGA 1128469 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| || ||||| |||||||||||| || Sbjct 1128468 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGG 1128409 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| | || || | ||||| ||||| || | || || Sbjct 1128408 AATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAAC 1128349 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||| ||||| ||||| || || | ||||| |||| Sbjct 1128348 CTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 1128311 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| || || || |||||||| |||| Sbjct 1128756 ACCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGA 1128697 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| || || || || || |||||||| | |||||| || || || Sbjct 1128696 AAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGATCGGGAGG 1128637 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || || ||||| | || ||| | ||||| |||||||| | ||| || Sbjct 1128636 GATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAAC 1128577 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| || |||||||| || || | |||||| ||||| |||||||| Sbjct 1128576 TTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 1128529 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || || || | |||| || || ||||| ||||| |||| | Sbjct 1128983 CCACCACGAAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAA 1128924 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || |||||||| || | ||| || || || ||| Sbjct 1128923 AGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGA 1128864 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || || | ||||| || || |||| || ||| Sbjct 1128863 ATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACT 1128804 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||| || || | ||||| || || |||||||| Sbjct 1128803 TCGAGCGTAATCGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 1128757 Score = 125 bits (138), Expect = 1e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||| ||| || || || ||||| |||| Sbjct 1128218 ACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGA 1128159 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || || || || |||| || |||||||| || Sbjct 1128158 AAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGG 1128099 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| || || || | ||||| Sbjct 1128098 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGAC 1128039 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 1128038 CTCGAGGGTGATGGTCTTGCCGGT 1128015 >seq46 Length=1231756 Score = 156 bits (172), Expect = 9e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | || || || |||||||||||||||| Sbjct 616490 ACCGCCACGAAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 616549 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||||| || |||||||| || Sbjct 616550 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGG 616609 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| |||||||| | ||||| Sbjct 616610 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 616669 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||| ||||| | ||||| ||||| || ||||| || Sbjct 616670 CTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 616720 >seq146 Length=3337086 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || || || ||||| |||| ||| |||||||||||||| || || || ||||| || || Sbjct 58758 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 58699 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| ||||| || || || ||||||||||| || ||||| | || || | ||| Sbjct 58698 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 58639 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| || || ||||| ||||||||||| | ||||| ||||| Sbjct 58638 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 58580 >seq62 Length=867 Score = 93.3 bits (102), Expect = 9e-14 Identities = 164/236 (69%), Gaps = 15/236 (6%) Strand=Plus/Plus Query 109939 GCAACATCATCAAATTGCGGGAACCCCCTAAAGCATATGATACCAAGGTTGATTGTGAAA 109998 || ||||| |||||||||||| | | |||||||| | | | ||| | | | |||| Sbjct 409 GCGACATCCTCAAATTGCGGGGAACTCCTAAAGCTTCCACTCCAAAGCCGGTTCGCGAAA 468 Query 109999 GCATCAGCTGGCCGAG--AACAGAACTCGGGTATGGTAAAAATTCATATGATGCCACAAT 110056 || | | ||||| | ||||| |||||||| | ||||| | ||||| ||||| Sbjct 469 GCCGCCGGTGGCCAGGTTAACAGC-CTCGGGTACTGGAAAAACGTGGAAGATGCGACAAT 527 Query 110057 GGGCAATCCGCAGCCAAGCCTCTAAAGG--------AAAATTATTCCCATGAGGAAGGTT 110108 || ||||||||||||||||| ||||||| | | | |||| | |||||||| Sbjct 528 GGACAATCCGCAGCCAAGCCCCTAAAGGCTCCCAGTAGAGGGACGCCCACGGGGAAGGTT 587 Query 110109 CAACGACTAAACGGTGATGGGTCTGGTGCTTA---GCACAGGCTTAAGATATAGTC 110161 || |||| ||||| ||||||| | | || | || | |||||||||| |||| Sbjct 588 CAGAGACTTAACGGGGATGGGTAT-GCGCCGAGAGGCGCCTGCTTAAGATAAAGTC 642 >seq190 Length=2042575 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/179 (71%), Gaps = 1/179 (1%) Strand=Plus/Plus Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286 |||||||||| || | |||||| ||| || || || ||||| || || | | ||| Sbjct 1615734 TCGGCATGAACGCGAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACAGGCTGCTCG 1615793 Query 230287 TGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCA 230346 | || || || | ||||| | || | |||| |||||||||| || |||||| || Sbjct 1615794 TCGCCCTCGGAAATGAGAAGATCTACAGGTCCACCAACCCCTTCGACTTCATGGAGAACA 1615853 Query 230347 TTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 | || ||| || || || ||||||||||| |||||||| | || || || |||||| Sbjct 1615854 TCTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCC 1615912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736370205994