Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq24 165 2e-35 seq146 138 3e-27 seq46 129 1e-24 >seq24 Length=1627699 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| ||||| || || || ||||| |||||||| || ||| || ||| Sbjct 1128532 CAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCGGAC 1128591 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||||||||| || || || |||||||| || |||||| Sbjct 1128592 ACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGATCAGCAA 1128651 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || ||||| ||||| |||||||| | || ||| | ||||| ||| | Sbjct 1128652 CGTCTTATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCTGATTACAACATT 1128711 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 1128712 CAGAAGGAGTCCACCCTTCACCTCGT 1128737 Score = 129 bits (142), Expect = 1e-24 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || || || || |||||||||||||| || || |||||||||| Sbjct 1128311 TCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCG 1128370 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || || || ||||| |||||||| || || || ||||| ||||| |||||| | | Sbjct 1128371 ACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 1128430 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | |||||||| || |||||||| ||||| | || || |||| || || |||| || | Sbjct 1128431 TTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGG 1128490 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || ||||| || Sbjct 1128491 AGTCCACGCTCCATCTGGT 1128509 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||||||||| || ||| || |||||||| || ||||| Sbjct 1128013 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGT 1128072 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || ||||| || ||||| || || || || ||||| |||| Sbjct 1128073 CGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAA 1128132 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || || || | || ||| | ||||| || | || || ||||| || || | Sbjct 1128133 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 1128192 Query 178123 ATCTTGTT 178130 | |||||| Sbjct 1128193 ACCTTGTT 1128200 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || ||||| || ||||| || || || || Sbjct 1128760 CAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCCGAT 1128819 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| || ||||| || || || ||||| Sbjct 1128820 ACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAGCAG 1128879 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || ||||| || ||||| || || || | |||||| | ||||| || || Sbjct 1128880 CGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAATATC 1128939 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 1128940 CAGAAGGAGTCCACGCTCCACCTCGT 1128965 >seq146 Length=3337086 Score = 138 bits (152), Expect = 3e-27 Identities = 133/171 (78%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 |||||| || || ||||| || || || |||||||| ||||| || ||| ||||| || Sbjct 58579 TTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 58638 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || || || |||||||||||||| || ||||||||||| || || || || || Sbjct 58639 CGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 58698 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 ||| ||||||||||| |||||||| ||||| | || ||| | ||||| || Sbjct 58699 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAA 58749 >seq46 Length=1231756 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || || |||||||| ||||| || ||| ||| Sbjct 616714 CAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGAC 616655 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || ||||| || ||||| || Sbjct 616654 ACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAG 616595 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || | || || ||| || Sbjct 616594 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTACAACATC 616535 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 616534 CAGAAGGAGTCGACCCTCCACCTCGT 616509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727945787934