Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq954 242 4e-59 seq808 86.0 7e-12 >seq954 Length=26895 Score = 242 bits (268), Expect = 4e-59 Identities = 648/983 (66%), Gaps = 22/983 (2%) Strand=Plus/Plus Query 53701 CAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 53760 ||| |||| ||||||| || || || || ||||||| | | ||| ||| | | || Sbjct 24188 CAAGGCAAGCGATGCCAAGTTGCAGACCGCCACCTCATCCGGAGCCGAATACTCGACGAT 24247 Query 53761 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 53820 ||| || || ||||| | ||| || |||| || | ||| || ||||| ||| Sbjct 24248 CTCGGTACAGAGATTGGAGCTGCGGATAGTGCCTAGGTTCTTTTGGTTGCTCTTGCGGTT 24307 Query 53821 ACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGC 53880 || ||||||||||| ||||| || | |||||||| |||| | || | || || Sbjct 24308 GCAGTGGTCCTTATAAAGCATGAAAGGATTTCCAGTTTCCGTCTGTGCCTCCAAGATGGC 24367 Query 53881 TTTCCAGACGACACGAGCCTTTATTATAGATTTGT-ATCTCTT--TTCTCTTTCGTATAG 53937 | ||| | ||||||||| || ||| | | | ||| ||||||| Sbjct 24368 GTACCACAGCTTTTGAGCCTTTAG---AGTCTTGCGACCGCGGCCTTCCTTTTCGTACTT 24424 Query 53938 TGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 53997 | ||||| || ||||| || || || || | | | ||||| ||||| | || Sbjct 24425 TTCGTACAAGGCCTCGAACTCCTCACCATAACAATCGGCAAGGCCAGGGCATTCGTTAGG 24484 Query 53998 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 54057 |||||||| | ||| ||||||| | | ||||||||||| || ||||| || ||||| Sbjct 24485 GCACATCAAGGTCCAGTCTCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCA 24544 Query 54058 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 54117 || || | || ||||| | || || | || || || || |||||| |||||| Sbjct 24545 GAGTGCGAGGAAAAGATCCCGGGCTCGAACCTCTTCCTTGCCGTGATTCTTGCGAAGATC 24604 Query 54118 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCG 54177 | |||| | | | ||| | ||||| || || | ||| |||| | |||| || || Sbjct 24605 CAAGAACTCGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCGGGGCG 24664 Query 54178 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 54237 || || || ||||| || | ||| || |||||||| || | || | | ||| ||||| Sbjct 24665 CTTATTACCACCCTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATCGGAAT 24724 Query 54238 AATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACT 54297 ||| || ||||||| || || ||||| | ||||| || |||||||||| | Sbjct 24725 AATGCCGTTGGATGTTCCGTTTGTCCCCGCAATATATGAGCCCGTGGCACGAATGCGATG 24784 Query 54298 AATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 54357 ||| || || || || || |||||||| || || | ||||||| || | || || Sbjct 24785 AATGTTGAGGCCGATGCCGCCGGCCATTTTTGAAATCATTGCGCATGTCTTCAGGGTGTC 24844 Query 54358 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 54417 ||| || ||||| |||||||||||| |||||| | || || || ||||| ||| Sbjct 24845 ATAAATTCCCTCGATACTATCATCCTTCATGTCTACGAGGAAGCACGAAGACAGCTGGGC 24904 Query 54418 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 54477 | || || || ||||| | || || |||||||| || || |||| || | Sbjct 24905 TTGGGGTGTGCCGGCGTTAAAGAGAGTGGGTGAAGCGTGTGTGAAAAATTTGGACGACAT 24964 Query 54478 TAGATTGTACGTCTCGAT----AGCTGA--GTCTATATCCCATTGATGAATTCCTACTGC 54531 ||||||||||| || || ||| | ||| || ||| ||| || || || Sbjct 24965 GAGATTGTACGTTTCAATCACACGCTCAACGTC-ATCGCCC-----CAAATACCGACGGC 25018 Query 54532 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTA 54591 ||||||||| | |||||||||||||| || || ||||| || | |||||| | ||| Sbjct 25019 GACACGCATAATCATGTGCTGAGGTCGCTCGACAATCTTCCCGTCAAGTTTCAGGAGGTA 25078 Query 54592 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATA 54649 ||| ||| | || || || || || || | ||| ||||| || | ||||| | | Sbjct 25079 CGATCGTTCGAGTGTCTTGAAGCCGAAGTATTGGTAATTGAAA--TCCCTGTCGTAGACA 25136 Query 54650 ATAACTGAGTTGAGTTTATCCTT 54672 || |||| | ||| | ||||| Sbjct 25137 ATGGCTGAATCGAGCTCCTCCTT 25159 >seq808 Length=275957 Score = 86.0 bits (94), Expect = 7e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| | ||| ||||| ||| ||| |||||||| || | | || | || ||||| Sbjct 155138 AACAAGAGACACGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCATTGGAG 155197 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| ||||||||||| || ||||| || ||||| ||||| | || Sbjct 155198 AAGGTGAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCG 155257 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 24277 ||||| || || || || || || ||||| Sbjct 155258 CTGAAGAAGATACCCTCGACGGCAGCGAAGGC 155289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593709844312320