Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq808 226 3e-54 seq1408 159 4e-34 seq910 114 1e-20 seq2 87.8 2e-12 >seq808 Length=275957 Score = 226 bits (250), Expect = 3e-54 Identities = 324/451 (72%), Gaps = 4/451 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||||| |||||||| | | | |||||| |||||| |||||| Sbjct 155354 AGAAGGCCGACTGGGCTCTGCGATGGATCGCTGACCGCGAGGCCACCTTCGCTCAGCGCC 155295 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || |||||||| ||||||||||| ||||||| || || ||| |||| || | Sbjct 155294 TCGTCGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTTCT 155235 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || ||||||||||| || || || ||| ||| ||||||||||| | | Sbjct 155234 GGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACCTTCTCCAATGAGCTCATCTCTCGTG 155175 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 | |||||||| || |||||| || ||| | ||||| |||| | ||| || || Sbjct 155174 ATGAGGGTCTTCACACCGACTTCGCGTGTCTCTTGTTCTCGCATCTCAAGCACCGCCCCG 155115 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 | | || | ||| ||| ||| | ||||| || ||| ||||||||| ||||||| Sbjct 155114 ACAAGCAGCTCATCAAGGACATCATTACCGATGCCGTCAAGATCGAGCAGGAGTTCCTCA 155055 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 | || || || || |||| ||||| || | || ||||| | ||| ||| ||||| Sbjct 155054 CTGAGGCTCT-CCCTTGCGCCCTGCTCGGCATGAA-CGCGAACCTCATGAAGCAGTACAT 154997 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 |||||||||||||||||||| || ||| || | | | ||| ||||| | | Sbjct 154996 TGAGTTCGTCGCCGACAGGCTACTTGTCGCTCTCGGCAATGAGAAGATCTACAGGTCCAC 154937 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCC 117430 |||||| | ||||| ||| | ||||||| Sbjct 154936 CAACCCCTTCGACTTCATGGAGAACATCTCC 154906 Score = 158 bits (174), Expect = 1e-33 Identities = 213/288 (74%), Gaps = 9/288 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||| | |||||| | || || Sbjct 155782 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTCTGGACTGCTGAGGAGATTGATCTC 155723 Query 116696 TCCAAGGA-CACGAGCGACTGGG--AGC--GCTTGAACGACAACGAGCGCCATTTCATCA 116750 |||||||| | | | |||||||| | | ||| || || ||||| |||||||| Sbjct 155722 TCCAAGGATCTCCA-CGACTGGGGTAACAAGCTC-AATGATGACGAGAAGTATTTCATCT 155665 Query 116751 AGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC 116810 ||| | || ||||| |||||||| ||||||||||||||||||||| || || |||| Sbjct 155664 CTCACATTCTTGCCTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTCGTTGAGC 155605 Query 116811 GTTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCC 116869 | ||| || | | |||| ||| | | ||||| || ||||||||||| || |||||| Sbjct 155604 GATTCAGCGCCG-AGGTCCAGATTCCTGAGGCCCGCTGCTTCTACGGTTTCCAGATCATG 155546 Query 116870 ATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||||| | ||||| || | || || |||||| || || ||| Sbjct 155545 ATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATTGATACCTAC 155498 >seq1408 Length=106487 Score = 159 bits (176), Expect = 4e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| |||||||| ||||| || || || ||||| |||||||| ||| |||| ||||| | Sbjct 91275 AAACATGCAAATCTTCGTCAAGACCCTAACGGGTAAAACCATTACCCTCGAGGTCGAGTC 91216 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | |||| | | | ||||| || || | ||||| |||||||||||| | || Sbjct 91215 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 91156 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || |||| ||| ||||| ||||| || |||| ||||||||| |||||| Sbjct 91155 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 91096 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| |||| || || || || Sbjct 91095 CAACATCCAGAAGGAGTCCACCCTCCACCTCGT 91063 >seq910 Length=30028 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755 ||| |||| || || || || ||||| ||||| ||| |||| ||||| | |||||| | Sbjct 19474 ATAGTCGTCAAGACCCTTACCGGCAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACC 19533 Query 40756 GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGA 40815 | | | ||||| || || | ||||| ||||| || || | ||||| |||||| Sbjct 19534 ATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGA 19593 Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875 | || | ||| ||||| ||||| || || | ||||||||| |||||||| |||||| Sbjct 19594 TTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAATATCCAG 19653 Query 40876 AAGGAGGCCACGCTGCATCTAGT 40898 |||||| | || || ||||| || Sbjct 19654 AAGGAGTCTACTCTCCATCTTGT 19676 Score = 107 bits (118), Expect = 2e-18 Identities = 137/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| |||||||| | || ||||| || | || | | | |||| ||||| Sbjct 19184 ACCGGCAAGACCATCACTTTGGAGGTCGAGTCCTCTGATACTATCGACAACG-TCAAGTC 19242 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || |||| ||||| |||||||||||| | |||||||| || || || | ||| || || Sbjct 19243 GAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATTTTCGCTGGAAA 19302 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || |||| ||||||||| |||||||| || ||||||||| | || || || Sbjct 19303 GCAGCTTGAGGACGGCCGCACCCTCTCTGACTACAATATTCAGAAGGAGTCTACTCTCCA 19362 Query 40893 TCTAGT 40898 ||| || Sbjct 19363 TCTTGT 19368 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| || || || |||| || ||| | | Sbjct 19924 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAGACTATTACGCTCGAGGTTGAATCTTCG 19983 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | ||| || |||| ||||| || || || ||| | || ||| Sbjct 19984 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGAATTCCCCCCGATCAG 20043 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| ||||| ||||| || || | ||||| || || |||||| Sbjct 20044 CAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTTTCTGATTACAAC 20103 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || ||||| || Sbjct 20104 ATCCAGAAGGAGTCCACACTCCATCTTGT 20132 >seq2 Length=228398 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 || || || || ||||||||||| ||||||||| | || ||||| || | |||| | Sbjct 5411 TTTGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 5470 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | ||| || |||| || || ||||| |||||| | |||||||| || || Sbjct 5471 GACAATGTGAAGTCCAAGATTCAGGATAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTT 5530 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| || || ||||| || || | |||||||| || ||||| || |||||| Sbjct 5531 ATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAAG 5590 Query 40879 G 40879 | Sbjct 5591 G 5591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515208998659840