Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq910 123 2e-23 seq1408 113 4e-20 seq2 104 2e-17 >seq910 Length=30028 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || |||||||||||||| | ||||| ||| || ||||| Sbjct 19899 GTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCAAGCTG 19840 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| |||||||||| || ||||||||||| || ||||||||||| || || Sbjct 19839 CTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTT 19780 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGG 118713 || || | |||| |||||||| || | || || |||| ||| | ||| ||||| | Sbjct 19779 GGACTTCACGTTGTCGATGGTGTCCGATGAT-TCAACTTCGAGGGTAATCGTCTTGCCAG 19721 Query 118714 TCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||| || || || |||||||| Sbjct 19720 TAAGAGTCTTCACGAAGATCTGCAT 19696 Score = 123 bits (136), Expect = 2e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| ||| ||||| || || ||||||||||| | |||||| |||||| | Sbjct 20131 CAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCAA 20072 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || |||||| | |||||||||||||||||||| || || || |||||||| || Sbjct 20071 GCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCTTCCTTGTCCTGAA 20012 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| ||| |||| || ||||||| || | || |||| Sbjct 20011 TCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAGCGTAATAGTCTTGC 19952 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || || ||||| |||||||| Sbjct 19951 CAGTAAGGGTCTTGACAAAGATCTGCAT 19924 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/184 (72%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| |||||||| || ||||| ||||| || | ||||| ||||| | Sbjct 19367 CAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCCTCAA 19308 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| ||||||||| | || || |||||||| ||||| || |||||||||||||| || Sbjct 19307 GCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19248 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| || || | | ||||||||| | || | || |||| Sbjct 19247 TCTTCGACTTGACGTTGTCGATAGTATCAGAGGACTCGACCTCCAAAGTGATGGTCTTGC 19188 Query 118711 CGGT 118714 |||| Sbjct 19187 CGGT 19184 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/196 (70%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| |||||||| || || || ||||| || | ||||| |||||||| Sbjct 19675 CAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCATCCTCGA 19616 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || || ||| | || | || || || || ||||| || ||||||||||| | Sbjct 19615 GCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGA 19556 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| |||||| | ||||||||||| ||| | || |||| Sbjct 19555 TCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTGC 19496 Query 118711 CGGTCAGAGTTTTTAC 118726 |||| || || || || Sbjct 19495 CGGTAAGGGTCTTGAC 19480 >seq1408 Length=106487 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| ||||||||||| Sbjct 91068 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 91127 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| || |||||||| || || || |||||||||||||| || || Sbjct 91128 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 91187 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||||| | ||||||||||| ||| | ||||| || || Sbjct 91188 GGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTAATGGTTTTACCCGT 91247 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || || |||||| Sbjct 91248 TAGGGTCTTGACGAAGATTTGCATG 91272 >seq2 Length=228398 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || ||||| |||||||| | ||||| |||||||||||| ||||| ||| | || Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 ||||||||||| ||||| || || |||||||| || ||| || || || | ||| Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | ||||||| | ||||||||| | ||| | || ||||| || || || || |||||| Sbjct 5469 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAA 5410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433822024904128