Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq910 123 2e-23
seq1408 113 4e-20
seq2 104 2e-17
>seq910
Length=30028
Score = 123 bits (136), Expect = 2e-23
Identities = 152/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || |||||||||||||| | ||||| ||| || |||||
Sbjct 19899 GTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCAAGCTG 19840
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| ||||| |||||||||| || ||||||||||| || ||||||||||| || ||
Sbjct 19839 CTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTT 19780
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGG 118713
|| || | |||| |||||||| || | || || |||| ||| | ||| ||||| |
Sbjct 19779 GGACTTCACGTTGTCGATGGTGTCCGATGAT-TCAACTTCGAGGGTAATCGTCTTGCCAG 19721
Query 118714 TCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| || || || ||||||||
Sbjct 19720 TAAGAGTCTTCACGAAGATCTGCAT 19696
Score = 123 bits (136), Expect = 2e-23
Identities = 153/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| ||| ||||| || || ||||||||||| | |||||| |||||| |
Sbjct 20131 CAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCAA 20072
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || |||||| | |||||||||||||||||||| || || || |||||||| ||
Sbjct 20071 GCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCTTCCTTGTCCTGAA 20012
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | |||| ||| |||| || ||||||| || | || ||||
Sbjct 20011 TCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAGCGTAATAGTCTTGC 19952
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || || || || ||||| ||||||||
Sbjct 19951 CAGTAAGGGTCTTGACAAAGATCTGCAT 19924
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/184 (72%), Gaps = 1/184 (1%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| |||||||| || ||||| ||||| || | ||||| ||||| |
Sbjct 19367 CAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCCTCAA 19308
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| ||||||||| | || || |||||||| ||||| || |||||||||||||| ||
Sbjct 19307 GCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19248
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | |||| || || | | ||||||||| | || | || ||||
Sbjct 19247 TCTTCGACTTGACGTTGTCGATAGTATCAGAGGACTCGACCTCCAAAGTGATGGTCTTGC 19188
Query 118711 CGGT 118714
||||
Sbjct 19187 CGGT 19184
Score = 84.2 bits (92), Expect = 2e-11
Identities = 137/196 (70%), Gaps = 1/196 (1%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| |||||||| || || || ||||| || | ||||| ||||||||
Sbjct 19675 CAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCATCCTCGA 19616
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || || ||| | || | || || || || ||||| || ||||||||||| |
Sbjct 19615 GCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGA 19556
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | |||| |||||| | ||||||||||| ||| | || ||||
Sbjct 19555 TCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTGC 19496
Query 118711 CGGTCAGAGTTTTTAC 118726
|||| || || || ||
Sbjct 19495 CGGTAAGGGTCTTGAC 19480
>seq1408
Length=106487
Score = 113 bits (124), Expect = 4e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| | ||||| |||||||||||
Sbjct 91068 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 91127
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| || |||||||| || || || |||||||||||||| || ||
Sbjct 91128 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 91187
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||||| | ||||||||||| ||| | ||||| || ||
Sbjct 91188 GGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTAATGGTTTTACCCGT 91247
Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || || || ||||||
Sbjct 91248 TAGGGTCTTGACGAAGATTTGCATG 91272
>seq2
Length=228398
Score = 104 bits (114), Expect = 2e-17
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| ||||| |||||||| | ||||| |||||||||||| ||||| ||| | ||
Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
||||||||||| ||||| || || |||||||| || ||| || || || | |||
Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| ||||||| | ||||||||| | ||| | || ||||| || || || || ||||||
Sbjct 5469 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAA 5410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433822024904128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |