Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1408 114 1e-20 seq910 98.7 1e-15 seq2 96.9 4e-15 >seq1408 Length=106487 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 91080 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 91139 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 91140 GATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 91199 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || |||| || |||||||| |||||||| ||||| || Sbjct 91200 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTAATGGTTTTACCCGTTAGGGTCTTGAC 91259 Query 43172 AAAGATTTGCATTTTT 43187 ||||||||||| ||| Sbjct 91260 GAAGATTTGCATGTTT 91275 >seq910 Length=30028 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| |||||||||| || || || | || || |||||||||||||| || Sbjct 19887 CTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAA 19828 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| || || || |||| || | | |||||||||| ||| || || | ||| Sbjct 19827 GATGAGACGTTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTCA-CGT 19769 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||||| || |||| || || || ||||| || || ||||| | Sbjct 19768 TGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCA 19709 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 19708 CGAAGATCTGCAT 19696 Score = 95.1 bits (104), Expect = 1e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||||||||| |||| || || || |||| || |||||||| |||||||| Sbjct 19351 CTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAA 19292 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 || || ||||||||||||| || | || |||||||||| Sbjct 19291 AATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 19252 >seq2 Length=228398 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| |||||||||||||||| || || || | || || |||||||| || ||||| | Sbjct 5591 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 5532 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTC 43112 | || ||||||||||||| || | | |||||| ||| ||| | || | || | | Sbjct 5531 TAAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCC-TGAATCTTGGACTTCACATTG 5473 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| || || || || | |||||||| |||||||| || ||||| ||| Sbjct 5472 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACA 5413 Query 43173 AA 43174 || Sbjct 5412 AA 5411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571806278011520