Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1408 116 2e-21 seq910 102 5e-17 seq2 89.7 3e-13 >seq1408 Length=106487 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || ||||| | || || ||||| |||||||||||||| Sbjct 91045 CCGCCGCGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 91104 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||| || || ||||||||||| ||| Sbjct 91105 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 91164 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | |||| || | || ||||| Sbjct 91165 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 91224 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || |||||||| || || || || || || ||||| ||||| Sbjct 91225 TCGAGGGTAATGGTTTTACCCGTTAGGGTCTTGACGAAGATTTGCAT 91271 >seq910 Length=30028 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || || || || | || || | ||||||||| |||||| Sbjct 20114 TCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAA 20055 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||| ||| ||| | | |||||||| ||||| ||| | || | Sbjct 20054 ATGAGACGCTGCTGATCGGGGGGAATTCCTTCCTTGTCCTGAATCTTCGACTTCACATTG 19995 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | ||||| || || | ||| || || ||||| || || || || ||| Sbjct 19994 TCGATGGTATCCGAAGATTCAACCTCGAGCGTAATAGTCTTGCCAGTAAGGGTCTTGACA 19935 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 19934 AAGATCTGCAT 19924 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || || || | |||| || ||||| || |||||||| || || ||| |||| Sbjct 19371 AGAACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCC 19312 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || |||||||| || |||||||||||| ||| | || ||||||||| Sbjct 19311 TCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 19252 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | ||| | || ||||| |||| |||||||| Sbjct 19251 TGAATCTTCGACTTGACGTTGTCGATAGTATCAGAGGACTCGACCTCCAAAGTGATGGTC 19192 Query 34358 TTGCCGGT 34365 |||||||| Sbjct 19191 TTGCCGGT 19184 >seq2 Length=228398 Score = 89.7 bits (98), Expect = 3e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| || ||||| || || || ||| | || || | |||||| || |||||||| Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || |||||||||||| ||| | | |||||| || ||||| ||| | || | | Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 |||| || | || ||||| || | |||||||| ||||| ||||| || || ||||| Sbjct 5469 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAA 5411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323065763095040