Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq954 125 1e-23
seq808 123 5e-23
>seq954
Length=26895
Score = 125 bits (138), Expect = 1e-23
Identities = 192/271 (71%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTC-CTTAAGAG 94831
||||| || || ||||| || || || | || || || ||||| || | ||| || |
Sbjct 24782 ATGAATGTTGAGGCCGATGCCGCCGGCCATTTTTGAAATCATTGC-GCATGTCTTCAGGG 24840
Query 94832 TATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTT 94891
| |||||||| ||||| || |||||||| | | | | | ||||||||||| || || |
Sbjct 24841 TGTCATAAATTCCCTCGATACTATCATCCTTCATGTCTACGAGGAAGCACGAAGACAGCT 24900
Query 94892 GGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951
||| | | ||| || ||||| || ||||| ||||| || || ||| | | ||
Sbjct 24901 GGGCTTGGGGTGTGCCGGCGTTAAAGAGAGTGGGTGAAGCGTGTGTGAAAAATTTGGACG 24960
Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011
||||||||| || |||||||| ||| | | ||| || ||| ||||| || |
Sbjct 24961 ACATGAGATTGTACGTTTCAATCACACGCTCAACGTCATCGCCCCAAATACCGACGGCGA 25020
Query 95012 CACGCATAATCATGTCCTGAGGGCGCTCAAC 95042
||||||||||||||| |||||| ||||| ||
Sbjct 25021 CACGCATAATCATGTGCTGAGGTCGCTCGAC 25051
>seq808
Length=275957
Score = 123 bits (136), Expect = 5e-23
Identities = 115/146 (79%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| ||||| ||||| || || || |||||||| || ||||| || || ||||||||||||
Sbjct 155292 GTCGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTTCTGG 155233
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | || | ||||||||||||||| |||||||||| |||| ||| | ||
Sbjct 155232 CTCAAGAAGCGTGGCCTCATGCCTGGTCTCACCTTCTCCAATGAGCTCATCTCTCGTGAT 155173
Query 102038 GAAGGTCTTCATCGCGACTTTGCATG 102063
|| |||||||| |||||| || ||
Sbjct 155172 GAGGGTCTTCACACCGACTTCGCGTG 155147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989563916392720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |