Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq954 87.8 2e-12
>seq954
Length=26895
Score = 87.8 bits (96), Expect = 2e-12
Identities = 370/579 (64%), Gaps = 4/579 (1%)
Strand=Plus/Plus
Query 37969 CCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATA 38028
|| || |||||| || ||||| | | ||| ||| | | ||||| || |||| |||
Sbjct 24468 CCAGGGCATTCGTTAGGGCACATCAAGGTCCAGTCTCCGTTCTTTTCAACTCGTTTCATG 24527
Query 38029 AATAAATCAGGTACCCATAATGC-AGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087
|| | ||| || | ||| | ||| || ||| | ||| || || | ||||| || ||
Sbjct 24528 AAAAGATCGGGGATCCAGAGTGCGAGGAAA-AGATCCCGGGCTCGAACCTCTTCCTTGCC 24586
Query 38088 TACATTCTTTCTTA-AGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAA 38146
|||||| | | | | |||| ||||||| ||| ||||||||||| || | || |
Sbjct 24587 GTGATTCTTGCGAAGATCCAAGAAC-TCGAATACATCTGCGTGCCATGGCTCAAGGTAGA 24645
Query 38147 TCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTAT 38206
| | | ||||| || | |||| ||| ||||| | || || || | ||||| ||
Sbjct 24646 TGGCAAAGGCTCCGGGGCGCTTATTACCACCCTGGTCAACGTACCTGGCGGTGTTGTTGA 24705
Query 38207 ATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTAC 38266
| | | | ||| || | || || || ||| | |||||| | || | ||||| | |
Sbjct 24706 AGACACGAAGCATCGGAATAATGCCGTTGGATGTTCCGTTTGTCCCCGCAATATATGAGC 24765
Query 38267 CCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAG 38326
|| | || || || | || | || || || || || |||||| || | |
Sbjct 24766 CCGTGGCACGAATGCGATGAATGTTGAGGCCGATGCCGCCGGCCATTTTTGAAATCATTG 24825
Query 38327 CGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAA 38386
||||| || | || ||| | || || || ||||| |||||||| || || | |
Sbjct 24826 CGCATGTCTTCAGGGTGTCATAAATTCCCTCGATACTATCATCCTTCATGTCTACGAGGA 24885
Query 38387 AACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTA 38446
| || ||||| || | || || ||||||||||| | || || || || |||
Sbjct 24886 AGCACGAAGACAGCTGGGCTTGGGGTGTGCCGGCGTTAAAGAGAGTGGGTGAAGCGTGTG 24945
Query 38447 TGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGT 38506
|||| |||| ||||| ||| || ||||| || ||| || | ||| ||||
Sbjct 24946 TGAAAAATTTGGACGACATGAGATTGTACGTTTCAATCACACGCTCAACGTCATCGCCCC 25005
Query 38507 GAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545
|||||| | | || | ||| | ||| || || ||||
Sbjct 25006 AAATACCGACGGCGACACGCATAATCATGTGCTGAGGTC 25044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468515523208960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |