Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq954 87.8 2e-12 >seq954 Length=26895 Score = 87.8 bits (96), Expect = 2e-12 Identities = 370/579 (64%), Gaps = 4/579 (1%) Strand=Plus/Plus Query 37969 CCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATA 38028 || || |||||| || ||||| | | ||| ||| | | ||||| || |||| ||| Sbjct 24468 CCAGGGCATTCGTTAGGGCACATCAAGGTCCAGTCTCCGTTCTTTTCAACTCGTTTCATG 24527 Query 38029 AATAAATCAGGTACCCATAATGC-AGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087 || | ||| || | ||| | ||| || ||| | ||| || || | ||||| || || Sbjct 24528 AAAAGATCGGGGATCCAGAGTGCGAGGAAA-AGATCCCGGGCTCGAACCTCTTCCTTGCC 24586 Query 38088 TACATTCTTTCTTA-AGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAA 38146 |||||| | | | | |||| ||||||| ||| ||||||||||| || | || | Sbjct 24587 GTGATTCTTGCGAAGATCCAAGAAC-TCGAATACATCTGCGTGCCATGGCTCAAGGTAGA 24645 Query 38147 TCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTAT 38206 | | | ||||| || | |||| ||| ||||| | || || || | ||||| || Sbjct 24646 TGGCAAAGGCTCCGGGGCGCTTATTACCACCCTGGTCAACGTACCTGGCGGTGTTGTTGA 24705 Query 38207 ATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTAC 38266 | | | | ||| || | || || || ||| | |||||| | || | ||||| | | Sbjct 24706 AGACACGAAGCATCGGAATAATGCCGTTGGATGTTCCGTTTGTCCCCGCAATATATGAGC 24765 Query 38267 CCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAG 38326 || | || || || | || | || || || || || |||||| || | | Sbjct 24766 CCGTGGCACGAATGCGATGAATGTTGAGGCCGATGCCGCCGGCCATTTTTGAAATCATTG 24825 Query 38327 CGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAA 38386 ||||| || | || ||| | || || || ||||| |||||||| || || | | Sbjct 24826 CGCATGTCTTCAGGGTGTCATAAATTCCCTCGATACTATCATCCTTCATGTCTACGAGGA 24885 Query 38387 AACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTA 38446 | || ||||| || | || || ||||||||||| | || || || || ||| Sbjct 24886 AGCACGAAGACAGCTGGGCTTGGGGTGTGCCGGCGTTAAAGAGAGTGGGTGAAGCGTGTG 24945 Query 38447 TGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGT 38506 |||| |||| ||||| ||| || ||||| || ||| || | ||| |||| Sbjct 24946 TGAAAAATTTGGACGACATGAGATTGTACGTTTCAATCACACGCTCAACGTCATCGCCCC 25005 Query 38507 GAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545 |||||| | | || | ||| | ||| || || |||| Sbjct 25006 AAATACCGACGGCGACACGCATAATCATGTGCTGAGGTC 25044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468515523208960