Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq954 246 4e-60 seq808 86.0 8e-12 >seq954 Length=26895 Score = 246 bits (272), Expect = 4e-60 Identities = 649/983 (66%), Gaps = 22/983 (2%) Strand=Plus/Plus Query 65732 CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 65791 ||| |||| ||||||| || || || || ||||||| | | ||| ||| | | || Sbjct 24188 CAAGGCAAGCGATGCCAAGTTGCAGACCGCCACCTCATCCGGAGCCGAATACTCGACGAT 24247 Query 65792 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 65851 ||| || || ||||| | ||| || |||| || | ||| || ||||| ||| Sbjct 24248 CTCGGTACAGAGATTGGAGCTGCGGATAGTGCCTAGGTTCTTTTGGTTGCTCTTGCGGTT 24307 Query 65852 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 65911 || ||||||||||| ||||| ||| | |||||||| |||| | || | || || Sbjct 24308 GCAGTGGTCCTTATAAAGCATGAAAGGATTTCCAGTTTCCGTCTGTGCCTCCAAGATGGC 24367 Query 65912 TTTCCAGACGACTCGAGCCTTTATTATAGATTTGT-ATCTCTT--TTCTCTTTCGTATAG 65968 | ||| | | ||||||||| || ||| | | | ||| ||||||| Sbjct 24368 GTACCACAGCTTTTGAGCCTTTAG---AGTCTTGCGACCGCGGCCTTCCTTTTCGTACTT 24424 Query 65969 TGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 66028 | ||||| |||||||| || || || || | | | ||||| ||||| | || Sbjct 24425 TTCGTACAAGGCCTCGAACTCCTCACCATAACAATCGGCAAGGCCAGGGCATTCGTTAGG 24484 Query 66029 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 66088 |||||||| | ||| ||||||| | | ||||||||||| || ||||| || ||||| Sbjct 24485 GCACATCAAGGTCCAGTCTCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCA 24544 Query 66089 AAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 66148 || || | || | ||| | || || | || || || || |||||| |||||| Sbjct 24545 GAGTGCGAGGAAAAGATCCCGGGCTCGAACCTCTTCCTTGCCGTGATTCTTGCGAAGATC 24604 Query 66149 GAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 66208 | |||| | | | ||| ||||| || || | ||| ||||| | |||| || || Sbjct 24605 CAAGAACTCGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCGGGGCG 24664 Query 66209 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 66268 || || || ||||| || | ||| || |||||||| || | || | | ||| ||||| Sbjct 24665 CTTATTACCACCCTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATCGGAAT 24724 Query 66269 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACT 66328 ||| || |||||||| || || ||||| | ||||| || | |||||||| | Sbjct 24725 AATGCCGTTGGATGTTCCGTTTGTCCCCGCAATATATGAGCCCGTGGCACGAATGCGATG 24784 Query 66329 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 66388 ||| || || || || || |||||||| || || | ||||||| || | || || Sbjct 24785 AATGTTGAGGCCGATGCCGCCGGCCATTTTTGAAATCATTGCGCATGTCTTCAGGGTGTC 24844 Query 66389 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 66448 ||| || ||||| |||||||||||| |||||| | || || || ||||| ||| Sbjct 24845 ATAAATTCCCTCGATACTATCATCCTTCATGTCTACGAGGAAGCACGAAGACAGCTGGGC 24904 Query 66449 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 66508 | || || || ||||| | || || |||||||| || || |||| || | Sbjct 24905 TTGGGGTGTGCCGGCGTTAAAGAGAGTGGGTGAAGCGTGTGTGAAAAATTTGGACGACAT 24964 Query 66509 TAGATTGTACGTCTCAAT----AGCTGA--GTCTATATCCCATTGATGAATTCCTACTGC 66562 ||||||||||| ||||| ||| | ||| || ||| ||| || || || Sbjct 24965 GAGATTGTACGTTTCAATCACACGCTCAACGTC-ATCGCCC-----CAAATACCGACGGC 25018 Query 66563 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 66622 ||||||||| | |||||||||||||| || || ||||| || | ||||| | ||| Sbjct 25019 GACACGCATAATCATGTGCTGAGGTCGCTCGACAATCTTCCCGTCAAGTTTCAGGAGGTA 25078 Query 66623 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATA 66680 ||| ||| | || || || || || || | ||| ||||| || | ||||| | | Sbjct 25079 CGATCGTTCGAGTGTCTTGAAGCCGAAGTATTGGTAATTGAAA--TCCCTGTCGTAGACA 25136 Query 66681 ATAACCGAGTTGAGTTTATCCTT 66703 || | || | ||| | ||||| Sbjct 25137 ATGGCTGAATCGAGCTCCTCCTT 25159 >seq808 Length=275957 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| | ||| ||||| ||| ||| |||||||| || | | || | || ||||| Sbjct 155138 AACAAGAGACACGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCATTGGAG 155197 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || ||||| || ||||| ||||||||||| || ||||| || ||||| ||||| | || Sbjct 155198 AAGGTGAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCG 155257 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||| || || || || || || ||||| Sbjct 155258 CTGAAGAAGATACCCTCGACGGCAGCGAAGGC 155289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658159768178560