Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq954 257 2e-63 seq808 104 3e-17 >seq954 Length=26895 Score = 257 bits (284), Expect = 2e-63 Identities = 645/971 (66%), Gaps = 18/971 (2%) Strand=Plus/Plus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 ||||||| || || || || ||||||| | | ||| ||| | | || || || ||| Sbjct 24198 GATGCCAAGTTGCAGACCGCCACCTCATCCGGAGCCGAATACTCGACGATCTCGGTACAG 24257 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 || || | || || |||| || | ||| || ||||| ||| || ||| Sbjct 24258 AGATTGGAGCTGCGGATAGTGCCTAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCC 24317 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 |||||||| ||||| ||| | |||||||| |||| | || | || || | ||| | Sbjct 24318 TTATAAAGCATGAAAGGATTTCCAGTTTCCGTCTGTGCCTCCAAGATGGCGTACCACAGC 24377 Query 79801 ACTCGAGCCTTTATTATAGACTTGT-ATCTCTT--TTCTCTTTCGTATTGTGTATATAAT 79857 | ||||||||| || |||| | | | ||| ||||||| | | || || Sbjct 24378 TTTTGAGCCTTTAG---AGTCTTGCGACCGCGGCCTTCCTTTTCGTACTTTTCGTACAAG 24434 Query 79858 CGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAAC 79917 |||||||| || || || |||| | | ||||| ||||||| ||| |||||||| Sbjct 24435 GCCTCGAACTCCTCACCATAACAATCGGCAAGGCCAGGGCATTCGTTAGGGCACATCAAG 24494 Query 79918 GACCACTCTCCATCATCCTTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 79975 | ||| ||||| | || ||| ||||||||||| || ||||| || ||||| || || | Sbjct 24495 GTCCAGTCTCCGT--TCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGCGA 24552 Query 79976 TAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 80035 || ||||| | || || | ||| || || || |||||| |||||| | |||| Sbjct 24553 GGAAAAGATCCCGGGCTCGAACCTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAACT 24612 Query 80036 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTC 80095 | | | ||| | ||||| || || | ||| ||||| | |||| || || || || | Sbjct 24613 CGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCGGGGCGCTTATTAC 24672 Query 80096 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 80155 | ||||| || | ||| || |||||||| || | || | | ||| |||||||| || | Sbjct 24673 CACCCTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATCGGAATAATGCCGT 24732 Query 80156 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATA 80215 ||||||| || || ||||| | ||||| || |||||||||| | ||| | Sbjct 24733 TGGATGTTCCGTTTGTCCCCGCAATATATGAGCCCGTGGCACGAATGCGATGAATGTTGA 24792 Query 80216 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 80275 | || || || || |||||||| || || | ||||||| || | || ||||| || | Sbjct 24793 GGCCGATGCCGCCGGCCATTTTTGAAATCATTGCGCATGTCTTCAGGGTGTCATAAATTC 24852 Query 80276 CCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 80335 |||| || |||||||| |||||| | || || || ||||| ||| | | Sbjct 24853 CCTCGATACTATCATCCTTCATGTCTACGAGGAAGCACGAAGACAGCTGGGCTTGGGGTG 24912 Query 80336 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT 80395 | || || ||||| | || || |||||||| || || |||| |||| ||||||| Sbjct 24913 TGCCGGCGTTAAAGAGAGTGGGTGAAGCGTGTGTGAAAAATTTGGACGACATGAGATTGT 24972 Query 80396 ACGTCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAA 80453 |||| ||||| | | || | ||| | ||| || || ||||||||||| | Sbjct 24973 ACGTTTCAAT--CACACGCTCAACGTCATCGCCCCAAATACCGACGGCGACACGCATAAT 25030 Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513 |||||||||||||| || || ||||| | | ||||| | ||| ||| ||| | Sbjct 25031 CATGTGCTGAGGTCGCTCGACAATCTTCCCGTCAAGTTTCAGGAGGTACGATCGTTCGAG 25090 Query 80514 AGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 80571 || || || || || || | ||| ||||| || | ||||| | ||| | || | | Sbjct 25091 TGTCTTGAAGCCGAAGTATTGGTAATTGAAA--TCCCTGTCGTAGACAATGGCTGAATCG 25148 Query 80572 AGTTTATCCTT 80582 || | ||||| Sbjct 25149 AGCTCCTCCTT 25159 >seq808 Length=275957 Score = 104 bits (114), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| | ||| ||||| ||| ||| |||||||| || | | || || || ||||| Sbjct 155138 AACAAGAGACACGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCATTGGAG 155197 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||| ||||||||||| || ||||| || ||||| ||||| | || Sbjct 155198 AAGGTGAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCG 155257 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 |||||||| || || || || || ||||| || || | || | | ||| || Sbjct 155258 CTGAAGAAGATACCCTCGACGGCAGCGAAGGCGACGAGGCGCTGAGCGAAGGTGGCCTCG 155317 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 | |||| ||||| ||||||| ||||||||||| Sbjct 155318 CGGTCAGCGATCCATCGCAGAGCCCAGTCGGCCTTCTT 155355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718254578277760