Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq808 123 4e-23 >seq808 Length=275957 Score = 123 bits (136), Expect = 4e-23 Identities = 332/502 (66%), Gaps = 23/502 (5%) Strand=Plus/Minus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| | || ||||||| |||| | || | | | ||| Sbjct 155361 ATCCGCAAGAAGGCCGACTGGGCTCTGCGATGGATCGCTGACCGCGAGGCCACCTTCGCT 155302 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || || || ||||| ||||| ||||| |||||||| ||| ||||| || Sbjct 155301 CAGCGCCTCGTCGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCC 155242 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 || || |||||||||||||| || |||||||| || || || | || ||| | || Sbjct 155241 ATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACCTTCTCCAATGAGCTCATC 155182 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTG 125597 ||||| || ||||| || ||| ||||| || ||| |||| ||||| || | | Sbjct 155181 TCTCGTGATGAGGGTCTTCACACCGACTTCGCGTGTCTCTTGTTCTCGCATCTCAAGCAC 155122 Query 125598 CGTCCCGA-GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAG 125656 || ||||| |||| || || |||| ||||| | ||||||||||| | Sbjct 155121 CGCCCCGACAAGCAGCTC-----AT--CAAGGACATCA------TTACCGATGCCGTCAA 155075 Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAA 125716 ||| || || ||||| || || || | || || | | || | ||||||||| || Sbjct 155074 GATCGAGCAGGAGTTCCTCACTGAGGCTCTCCCTTGCGCCCTGCTCGGCATGAACGCGAA 155015 Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC-- 125774 || ||| ||||||| ||||| || || || | ||||| || | ||| Sbjct 155014 CCTCATGAAGCAGTACATTGAGTTCGTCGCCGACAGGCTACTTGTCG---CTCTCGGCAA 154958 Query 125775 -CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833 ||||| |||| ||| || ||||| || |||||| | ||| || || | || Sbjct 154957 TGAGAAGATCTACAGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGG 154898 Query 125834 TAAGACCAACTTTTTCGAGAAG 125855 ||||||||||| ||||||||| Sbjct 154897 CAAGACCAACTTCTTCGAGAAG 154876 Score = 116 bits (128), Expect = 5e-21 Identities = 204/292 (70%), Gaps = 10/292 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| | ||||| || ||||| | || ||| | ||||| Sbjct 155782 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTCTGGACTGCTGAGGAGATTGATCTC 155723 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG----TTTAT 125134 |||||||| || |||| |||| | | | ||| ||| ||||| || || Sbjct 155722 TCCAAGGATCTCCACGACTGGGGTAACAAGCTCAATGA---TGA-CGAGAAGTATTTCAT 155667 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 || |||||| | |||||||| |||| ||||| || ||||||||||| || || ||||| Sbjct 155666 CTCTCACATTCTTGCCTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTCGTTGA 155607 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253 |||||| ||| | ||||| |||| ||||| ||||| ||||| |||| Sbjct 155606 -GCGATTCAGCGCCGAGGTCCAGATTCCTGAGGCCCGCTGCTTCTACGGTTTCCAGATCA 155548 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||| |||||| | ||||| || | ||||| || ||||| | ||||| Sbjct 155547 TGATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATTGATACCTACAT 155496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741044527027840