Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq910 161 2e-34
seq2 102 2e-16
>seq910
Length=30028
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||| || || ||||| || || || ||||| ||||| | ||| ||
Sbjct 20135 AGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCC 20076
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || ||||| ||||| || | ||| ||||| || || |||||||| || |||
Sbjct 20075 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCTTCCTTGTCC 20016
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| | || ||||| || | |||||| || ||| ||||| || |||||||||
Sbjct 20015 TGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAGCGTAATAGTC 19956
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| |||||||| || || ||||| ||||||||
Sbjct 19955 TTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19924
Score = 105 bits (116), Expect = 2e-17
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||||| || ||||||||||| |||||||| || || | |||||
Sbjct 19371 AGAACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCC 19312
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || |||||||| ||||| || | ||| || || || || || || || || |||
Sbjct 19311 TCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 19252
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| | || || || || | ||||| | || ||||| | || || |||
Sbjct 19251 TGAATCTTCGACTTGACGTTGTCGATAGTATCAGAGGACTCGACCTCCAAAGTGATGGTC 19192
Query 104528 TTACCAGTAAGTGTTT 104543
|| || |||| | |||
Sbjct 19191 TTGCCGGTAACTATTT 19176
>seq2
Length=228398
Score = 102 bits (112), Expect = 2e-16
Identities = 132/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431
||||||||||| || ||||| || || | || || || || || ||||| || |||||
Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530
Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491
|| | ||| || || || || ||||| || |||||||||||||| | || ||||| ||
Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470
Query 104492 ACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
| || || | ||| || ||||| || || || ||||| || || || || || |||||
Sbjct 5469 ATCGTGTC-CGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAA 5411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151375032369472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |