Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1268 131 1e-25 seq910 93.3 3e-14 >seq1268 Length=9233 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||| |||||||||| || |||||||| Sbjct 6822 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATAGGGACAGTGGGAATCTCGT 6763 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 6762 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 6728 >seq910 Length=30028 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 ||| || ||| |||||| || || ||||||||||| | | || | || || | || Sbjct 20127 ATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCAAGCTG 20068 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || || || || || || || || ||||||| ||| | ||||| |||||| ||| || Sbjct 20067 CTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCTTCCTTGTCCTGAATCTT 20008 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 ||||||||| | || ||||| | |||||| || | |||||||| || || || Sbjct 20007 CGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAGCGTAATAGTCTTGCCAGT 19948 Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317 | ||| || || || |||||||| Sbjct 19947 AAGGGTCTTGACAAAGATCTGCAT 19924 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || | || || ||| |||||| ||||| |||||||||| Sbjct 19924 TACCACCACGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAG 19865 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | || || || ||||| || || ||||||||||||| | Sbjct 19864 AAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAG 19805 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || |||||| || || |||||| || | || || || ||||| Sbjct 19804 GAATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAA 19745 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||||| || || || || | || |||||||| |||||||| Sbjct 19744 CTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 19696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940733844304