Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1139 104 5e-17
>seq1139
Length=14403
Score = 104 bits (114), Expect = 5e-17
Identities = 176/250 (70%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 279318 GACGAAGCAGAGAAGGA-GACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCT 279376
||||| | ||| |||| ||| ||| || ||||| || || |||| ||||||||
Sbjct 6511 GACGAGGAGGAGGAGGATGAC-GAGGAGGGCGAGGACCTCTGCAACTGCACCTTCTCGCT 6569
Query 279377 CGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCG 279436
||| || |||| |||||||| || ||| || | ||| | ||||||| ||| | ||
Sbjct 6570 CGCCTACGGTGCCAAGATTCTTCTCAACCAAACTGGTCTCCGCCTCAAGCGCGGCCAGCG 6629
Query 279437 GTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAA 279496
|| ||||| ||||||||| || | || ||| ||||| ||||| ||||| ||
Sbjct 6630 CTACGGTCTTTGCGGTCCCAACGGTTCCGGCAAGTCTACTCTCATGCGTGCCATCAACAA 6689
Query 279497 CGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACG 279555
|| ||| | || || || || || ||| || ||||| | ||| |||| || |||||||
Sbjct 6690 CGAGCAGGTCGAGGGCTTCCCCAA-GCAGTCCGAGGTCAAGACCGTGTTCGTCGAGCACG 6748
Query 279556 ACATCGACTC 279565
|| | |||||
Sbjct 6749 ACTTGGACTC 6758
Score = 93.3 bits (102), Expect = 9e-14
Identities = 94/120 (78%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
||||| ||||| |||||||| || || || ||| ||||| | ||| ||| || ||
Sbjct 7942 CACTCGCGCATGCGCGGTCTCTCCGGCGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 8001
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| |||||| | || ||| ||||||||||||||||||| |||||||| || ||||||||
Sbjct 8002 TC-GTGGCAGCGACCCCACTTGATCGTTCTCGACGAGCCCACCAACTACCTCGACCGCGA 8060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027815940052144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |