Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1139 104 5e-17 >seq1139 Length=14403 Score = 104 bits (114), Expect = 5e-17 Identities = 176/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 279318 GACGAAGCAGAGAAGGA-GACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCT 279376 ||||| | ||| |||| ||| ||| || ||||| || || |||| |||||||| Sbjct 6511 GACGAGGAGGAGGAGGATGAC-GAGGAGGGCGAGGACCTCTGCAACTGCACCTTCTCGCT 6569 Query 279377 CGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCG 279436 ||| || |||| |||||||| || ||| || | ||| | ||||||| ||| | || Sbjct 6570 CGCCTACGGTGCCAAGATTCTTCTCAACCAAACTGGTCTCCGCCTCAAGCGCGGCCAGCG 6629 Query 279437 GTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAA 279496 || ||||| ||||||||| || | || ||| ||||| ||||| ||||| || Sbjct 6630 CTACGGTCTTTGCGGTCCCAACGGTTCCGGCAAGTCTACTCTCATGCGTGCCATCAACAA 6689 Query 279497 CGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACG 279555 || ||| | || || || || || ||| || ||||| | ||| |||| || ||||||| Sbjct 6690 CGAGCAGGTCGAGGGCTTCCCCAA-GCAGTCCGAGGTCAAGACCGTGTTCGTCGAGCACG 6748 Query 279556 ACATCGACTC 279565 || | ||||| Sbjct 6749 ACTTGGACTC 6758 Score = 93.3 bits (102), Expect = 9e-14 Identities = 94/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| |||||||| || || || ||| ||||| | ||| ||| || || Sbjct 7942 CACTCGCGCATGCGCGGTCTCTCCGGCGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 8001 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | || ||| ||||||||||||||||||| |||||||| || |||||||| Sbjct 8002 TC-GTGGCAGCGACCCCACTTGATCGTTCTCGACGAGCCCACCAACTACCTCGACCGCGA 8060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027815940052144