Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1408 167 4e-36 seq910 167 4e-36 seq808 125 1e-23 seq2 120 6e-22 seq1139 113 8e-20 >seq1408 Length=106487 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | || | ||| || |||||||| || |||||||| || |||||| Sbjct 91045 CCGCCGCGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 91104 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || || Sbjct 91105 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 91164 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||| ||||| | || || || Sbjct 91165 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 91224 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| |||||||| ||||| |||||||||||||| || ||||| Sbjct 91225 TCGAGGGTAATGGTTTTACCCGTTAGGGTCTTGACGAAGATTTGCAT 91271 >seq910 Length=30028 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || |||||||| || || ||||| ||||| || Sbjct 19922 CCACCACGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAA 19863 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || ||||| | |||||| ||||| ||| Sbjct 19862 AGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGA 19803 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||| ||| ||||||||||| | |||||| ||| Sbjct 19802 ATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAACT 19743 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| || || || || || || ||||| ||||| |||||||| Sbjct 19742 TCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 19696 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || | || || |||||||| || |||||||| ||||| || Sbjct 20150 CCACCACGAAGGCGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAA 20091 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| ||||| | || || ||||| ||| Sbjct 20090 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 20031 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| |||||||| | ||| || |||||||| || | ||||| || Sbjct 20030 ATTCCTTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACC 19971 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || || || ||||||||||| || |||||||| Sbjct 19970 TCGAGCGTAATAGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19924 Score = 145 bits (160), Expect = 1e-29 Identities = 154/202 (76%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || || ||||| || ||||| || || || ||||| || | ||||| || | Sbjct 19675 CAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCATCCTCGA 19616 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| |||||||| || | || ||||||||| || ||||| || |||||||| || | Sbjct 19615 GCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGA 19556 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| | |||||| ||||||||||| | || || || || | ||| ||||| || | Sbjct 19555 TCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTGC 19496 Query 68434 CCGTGAGGGTCTTGACGAATAT 68455 | || ||||||||||||| ||| Sbjct 19495 CGGTAAGGGTCTTGACGACTAT 19474 >seq808 Length=275957 Score = 125 bits (138), Expect = 1e-23 Identities = 313/472 (66%), Gaps = 10/472 (2%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||| ||||||||||| || || || |||||||||||||| |||||| | Sbjct 154843 CATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACC 154902 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 |||||| ||| |||||||||||| |||||||| || | | ||| | || Sbjct 154903 GAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGTAGATCTTCTCATTGCC 154962 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | | ||| || |||||||| |||||||| |||| |||| || ||| Sbjct 154963 GAGAGCGACAAGTAGCCTGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTCGCGTT 155022 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | || | ||| |||| || || | ||| |||| ||| | ||| || Sbjct 155023 CATGCCGAGCAGGGCGCAAGGGAGAGCCTCAGTGAGGAACTCCTGCTCGATCTTGACGGC 155082 Query 10175 TTCCTCGACGATGCTCTTTA----CCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || | |||| ||| | | | | ||| | || || ||| | ||| Sbjct 155083 ATCGGTAATGATGTCCTTGATGAGCTGCTTGTCGGGGC----GGTGCTTGAGATGCGAGA 155138 Query 10231 ACAGGAG-CTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289 ||| ||| | | | || | | ||| || ||||| || || ||||| ||| ||||| Sbjct 155139 ACAAGAGACACGCGAAGTCGGT-GTGAAGACCCTCATCACGAGAGATGAGCTCATTGGAG 155197 Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349 || ||||| |||||||| || || || ||||||||||||| | || | ||| Sbjct 155198 AAGGTGAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCG 155257 Query 10350 GAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 ||| | | |||||| ||| | ||||||||||||||| ||||||| Sbjct 155258 CTGAAGAAGATACCCTCGACGGCAGCGAAGGCGACGAGGCGCTGAGCGAAGG 155309 >seq2 Length=228398 Score = 120 bits (132), Expect = 6e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || || || ||||| || || || | ||||| || | |||||| |||||||| || Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || |||||||| || || || ||||| || |||||||| | ||| || ||| Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || || | ||||||||| || ||||||||||||||||| || Sbjct 5469 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAA 5411 >seq1139 Length=14403 Score = 113 bits (124), Expect = 8e-20 Identities = 657/1036 (63%), Gaps = 38/1036 (4%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| ||||||| |||||| |||||| || || || ||| || Sbjct 7547 CGCCACTGGATGTACTCCGAGGGGGTCTTGTCCAAGTGGTTATCGATGTGCGCGAAGGCG 7488 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGA-GTCG 225098 ||||| | ||| || || |||||||| |||| | | | | ||||| || | Sbjct 7487 TGCTGCTTGATGTAGGCGATACGCATGTTCTCGTGCTGGTAGATCTCA--CCCGACGTGG 7430 Query 225099 GT-TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 | || || || |||||||| || |||||||| || | |||||| ||||| |||||||| Sbjct 7429 GGATGAGC-TCACCGGTGAGCACGTTGATGAGGGTGGACTTGCCGGCACCGTTGGGGCCG 7371 Query 225158 ATCACGCCAATCCGGGAT--GACATTGCAACCTGCGAGTTCACGTTGCTGAA---GATCT 225212 || ||| | || ||||| || ||| ||| || | | || | ||| | || Sbjct 7370 ATGACGGCGATACGGGAGCCGAGCGAGCA--CTGGAAGGTGATGTCGGTGAGCTGGGGCT 7313 Query 225213 CAGGGCCAGTTTGGTAAGCAAAGGCCAC------GCCACGCAGCTTCATGATGGCACGGT 225266 || | |||| ||| || | |||| || |||||| | Sbjct 7312 TGGGAGTACCGGGGTACTGGAAGCTCATCTTGGTGGCACGGAG------GATGGCCTTGG 7259 Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGT 225326 |||||| | | |||||| ||||| |||||||||||||| ||| || ||| | Sbjct 7258 CCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGCTGAACTCCATCTCCGAGG 7199 Query 225327 CCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTC 225386 | || |||||||| || ||| ||| | ||| |||||| | ||||| | Sbjct 7198 CGCCGAGCTCGTAGTACGAGCGGGCCGAGGGGCACTTGCGCACGAACTCCTTGAGGTTAC 7139 Query 225387 CGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCG 225445 | || | ||||||||| | || |||| || | || ||| | | || | Sbjct 7138 CCCTGTAGCGCTTGAGCTTGAAGCGCT---CGTAGTGGATGATGTGCTGGGTG-ACGTTG 7083 Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTGAG 225504 || ||||| || | |||||||||||| |||||||| | || | | || | ||| Sbjct 7082 TCGAGGAAACCGGTGTCGTGGGACACGATGATGGAGGTGCAGG---GGGAGTTGAT-GAG 7027 Query 225505 GTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564 || | |||||| ||||| | ||||||| ||||| || || ||||| || || Sbjct 7026 GTAGTTCTCGAGCCACTTGACGTTCTTCACGTCCAAATGGTTAGTGGGCTCGTCGAGGAG 6967 Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624 ||||| || | | || || ||| || |||| |||||||| ||||| || || Sbjct 6966 GAGGATATCGGGGGCCTCGAAGACGGCACGGCAAAGAGCGAGCTTCATCTTCCAACCACC 6907 Query 225625 GGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGAGCGT 225684 ||| |||| | ||| | | | | | ||| |||||| |||| | |||| Sbjct 6906 GGAGAGGGCGGTGATCTCGCCCTGGATCATGGGGTCGGTGAAGCCGAACTCGACGAGCTG 6847 Query 225685 CTGGATAATGCGCTCG--GGAGAGCT-GCGAGCGGCAACGTTGGGGTCGGACGAGAGGTA 225741 || || | | ||| |||| || | | |||| | | | | | | | | Sbjct 6846 CTTGACGACGTCCTCCTTGGAGGTCTCGACACCGGCCTCCTCGAGCTTCTTCATGGTCCA 6787 Query 225742 ATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCG 225801 || |||||| || | | | | ||| | |||||| || ||| |||| ||| Sbjct 6786 GTCGATGGTGGTCATCTCGGTATCGGCAGAGTCCAAGTCGTGCTCGACGAACACGGTCTT 6727 Query 225802 GAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGT 225861 || || || | |||||||||||| | ||| | || || ||||| | || || Sbjct 6726 GACCTCGGACTGCTTGGGGAAGCCCTCGACCTGCTCGTTGTTGATGGCACGCATGAGAGT 6667 Query 225862 ACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAG 225921 | |||||| | |||||||||||| || ||||| | | |||||||||| | ||| Sbjct 6666 AGACTTGCCGGAACCGTTGGGACCGCAAAGACCGTAGCGCTGGCCGCGCTTGAGGCGGAG 6607 Query 225922 GCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAG 225981 | || ||| || || |||||| |||| ||||| || ||||| ||| | ||| || Sbjct 6606 ACCAGTTTGGTTGAGAAGAATCTTGGCACCGTAGGCGAGCGAGAAGGTGCAGTTGCAGAG 6547 Query 225982 GTCCTCACCCTCCTCG 225997 |||||| ||||||||| Sbjct 6546 GTCCTCGCCCTCCTCG 6531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921604151876480