Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1408 107 5e-18
seq808 91.5 3e-13
>seq1408
Length=106487
Score = 107 bits (118), Expect = 5e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| ||||| || | || ||||| || | ||| || || ||||| || ||||||| |
Sbjct 91045 CCGCCGCGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 91104
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || ||||||||||| ||||| || | |||
Sbjct 91105 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 91164
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || | || || || || || | || || || ||
Sbjct 91165 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 91224
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || || || || || || || ||||||||||| || |||||
Sbjct 91225 TCGAGGGTAATGGTTTTACCCGTTAGGGTCTTGACGAAGATTTGCAT 91271
>seq808
Length=275957
Score = 91.5 bits (100), Expect = 3e-13
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178
|||||| | ||| ||| |||| || | || |||| ||||| || | ||||||||
Sbjct 155064 GAGTTCCTCACTGAGGCTCTCCCTTGCGCCCTGCTCGGCATGAACGCGAACCTCATGAAG 155005
Query 269179 CAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTGTA 269237
|| || || || ||||| || || | | ||| || | ||||| ||||||| | ||
Sbjct 155004 CAGTACATTGAGTTCGTCGCCGACAGGCTACTTGTCG-CTCTCGGCAATGAGAAGATCTA 154946
Query 269238 CAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTT 269297
|| || | || ||||||| ||| ||||| || || |||| || ||||| |||||
Sbjct 154945 CAGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTT 154886
Query 269298 CTTCGAAAAGCGTGTCAGCGACTATCA 269324
|||||| |||||||| | ||||| ||
Sbjct 154885 CTTCGAGAAGCGTGTTGGTGACTACCA 154859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179630458913952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |