Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1408 107 5e-18 seq808 91.5 3e-13 >seq1408 Length=106487 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | ||| || || ||||| || ||||||| | Sbjct 91045 CCGCCGCGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 91104 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||||||||| ||||| || | ||| Sbjct 91105 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 91164 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || || || || || | || || || || Sbjct 91165 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 91224 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || || || || ||||||||||| || ||||| Sbjct 91225 TCGAGGGTAATGGTTTTACCCGTTAGGGTCTTGACGAAGATTTGCAT 91271 >seq808 Length=275957 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 |||||| | ||| ||| |||| || | || |||| ||||| || | |||||||| Sbjct 155064 GAGTTCCTCACTGAGGCTCTCCCTTGCGCCCTGCTCGGCATGAACGCGAACCTCATGAAG 155005 Query 269179 CAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTGTA 269237 || || || || ||||| || || | | ||| || | ||||| ||||||| | || Sbjct 155004 CAGTACATTGAGTTCGTCGCCGACAGGCTACTTGTCG-CTCTCGGCAATGAGAAGATCTA 154946 Query 269238 CAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTT 269297 || || | || ||||||| ||| ||||| || || |||| || ||||| ||||| Sbjct 154945 CAGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTT 154886 Query 269298 CTTCGAAAAGCGTGTCAGCGACTATCA 269324 |||||| |||||||| | ||||| || Sbjct 154885 CTTCGAGAAGCGTGTTGGTGACTACCA 154859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179630458913952