Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq910 100 3e-16 seq1408 93.3 4e-14 seq2 82.4 8e-11 >seq910 Length=30028 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || ||||| ||||| || | || |||||| |||| Sbjct 19371 AGAACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCC 19312 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || || |||| || |||||||||||||| || || || || || || Sbjct 19311 TCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 19252 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | |||||| || || || || | ||| | |||| Sbjct 19251 TGAATCTTCGACTTGACGTTGTCGATAGTATCAGAGGACTCGACCTCCAAAGTGATGGTC 19192 Query 64412 TTGCCGGT 64419 |||||||| Sbjct 19191 TTGCCGGT 19184 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || || ||||||||||| | | ||||| | || Sbjct 20135 AGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCC 20076 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||||||||| || ||||||| |||||||| ||||| ||||||||||| || || Sbjct 20075 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCTTCCTTGTCC 20016 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| | || || || | || | ||| Sbjct 20015 TGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAGCGTAATAGTC 19956 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || || || || ||||| Sbjct 19955 TTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19924 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || |||||||||||||| | | |||||| | |||||||||||||| || Sbjct 19892 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCA 19833 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| || || || ||||||||||| || || || || || || || ||| Sbjct 19832 GCAAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTC 19773 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || ||||| | || | |||||||| || | ||| Sbjct 19772 ACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTC 19713 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 19712 TTCACGAAGATCTGCAT 19696 >seq1408 Length=106487 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||| | | || || || || | || || || || || |||||||| || | Sbjct 91044 ACCGCCGCGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 91103 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||||||||| | || || ||||||||||| || || Sbjct 91104 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 91163 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || || || || || Sbjct 91164 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 91223 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | ||| || || || | || || ||||| |||||||| || Sbjct 91224 CTCGAGGGTAATGGTTTTACCCGTTAGGGTCTTGACGAAGATTTGCATGTT 91274 >seq2 Length=228398 Score = 82.4 bits (90), Expect = 8e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || ||||| |||||||| | | |||||| | || || |||||||| ||||| |||| Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || |||||||||||||| || ||||| || || || || || || ||| ||| || Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | || || || || || || | || | ||||||||| || | || || || ||| Sbjct 5469 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAA 5410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499634907032960