Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq954 188 7e-43 >seq954 Length=26895 Score = 188 bits (208), Expect = 7e-43 Identities = 598/919 (65%), Gaps = 6/919 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 |||||| | ||||| | |||||| || || || ||||||||||| || | || || Sbjct 25117 AATTACCAATACTTCGGCTTCAAGACACTCGAACGATCGTACCTCCTGAAACTTGACGGG 25058 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||||||| || || || | ||||| |||||| |||| ||| ||| | Sbjct 25057 AAGATTGTCGAGCGACCTCAGCACATGATTATGCGTGTCGCCGTCGGTATTTGGGGCGAT 24998 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||| | | ||| | | | || |||| | ||| | || || Sbjct 24997 GACGTTGAGCGTGTGATTGAAACGTACAATCTCATGTCGTCCAAATTTTTCACACACGCT 24938 Query 93895 ACCCCGACCCTGTTCAACGCGGGGAC-CCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | || || || || ||||| || || ||| ||| ||| |||||||||| ||||| | Sbjct 24937 TCACCCACTCTCTTTAACGCCGGCACACCCCAAGCC-CAGCTGTCTTCGTGCTTCCTCGT 24879 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| || ||| ||||||| |||| ||| ||| || || | | Sbjct 24878 AGAC-ATGAAGGATGATAGTATCGAGGGAATTTATGACACCCTGAAGACATGCGCAATGA 24820 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 | |||||| || || || ||||| ||| | || | | ||||||| ||| || | Sbjct 24819 TTTCAAAAATGGCCGGCGGCATCGGCCTCAACATTCATCGCATTCGTGCCACGGGCTCAT 24760 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 | || || || || || || ||||||||| | | || ||||| || |||||||||| Sbjct 24759 ATATTGCGGGGACAAACGGAACATCCAACGGCATTATTCCGATGCTTCGTGTCTTCAACA 24700 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || | ||||| |||||||||||| | | | || | || || |||| | Sbjct 24699 ACACCGCCAGGTACGTTGACCAGGGTGGTAATAAGCGCCCCGGAGCCTTTGCCATCTACC 24640 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| |||||||| || || | ||| | || || || ||||| |||||||| | Sbjct 24639 TTGAGCCATGGCACGCAGATGTATTCGAGTTCTTGGATCTTCGCAAGAATCACGGCAAGG 24580 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | || | ||| | || || ||| ||| |||||| | || || ||||| ||||||| Sbjct 24579 AAGAGGTTCGAGCCCGGGATCTTTTCCTCGCACTCTGGATCCCCGATCTTTTCATGAAAC 24520 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || || || ||| | ||||| | | || || || ||||| || || || ||| Sbjct 24519 GAGTTGAAAAGAACGGAGACTGGACCTTGATGTGCCCTAACGAATGCCCTGGCCTTGCCG 24460 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 | || ||| | || || | |||||| | |||||| | | ||| | Sbjct 24459 ATTGTTATGGTGAGGAGTTCGAGGCCTTGTACGAAAAGTACGAAAAGGAAGGCCGCGGTC 24400 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | ||| | | | ||| ||||||||| | ||| |||| | |||| ||| || | Sbjct 24399 GCAAGACTCTAAAGGCTCAAAAGCTGTGGTACGCCATCTTGGAGGCACAGACGGAAACTG 24340 Query 94493 GTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 | | || | ||| | | ||||| | ||| |||| |||| |||||| || |||| Sbjct 24339 GAAATCCTTTCATGCTTTATAAGGACCACTG-CAACCGCAAGAGCAACCAAAAGAACCTA 24281 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || ||| ||||| ||||| || |||||||| ||||||||| | ||||||| ||| Sbjct 24280 GGCACTATCCGCAGCTCCAATCTCTGTACCGAGATCGTCGAGTATTCGGCTCCGGATGAG 24221 Query 94612 ATTGCTGTGTGTAACCTGG 94630 | || || || ||| ||| Sbjct 24220 GTGGCGGTCTGCAACTTGG 24202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494713404480640