Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1408 91.5 1e-13
seq910 84.2 2e-11
>seq1408
Length=106487
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| || | ||| | || | || | | | |||||||| || ||||||||||||
Sbjct 91045 CCGCCGCGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 91104
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||||||| || || |||| |||| || ||||| ||||| || ||
Sbjct 91105 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 91164
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | |||| || | ||||| | ||||| ||
Sbjct 91165 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG-TCGATCGTGTCCGAGGACTCGAC 91223
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | |||||||| || || || || || || || ||||||
Sbjct 91224 CTCGAGGGTAATGGTTTTACCCGTTAGGGTCTTGACGAAGATTTGCATG 91272
>seq910
Length=30028
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||| || | || || || || || || ||||| | |
Sbjct 19889 GACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCA 19830
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| ||||| ||||| || ||||| ||||| || ||||| ||| || || |
Sbjct 19829 AAGATGAGACGTTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTCACG 19770
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | || || || |||| || | ||| || ||||| ||||| ||
Sbjct 19769 TTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTC 19710
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 19709 ACGAAGATCTGCAT 19696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496252574004480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |