Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq910 116 4e-21 seq1408 100 3e-16 seq808 91.5 1e-13 seq954 84.2 2e-11 seq2 82.4 7e-11 >seq910 Length=30028 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| |||||||| | ||||| ||| || ||||| || ||| Sbjct 19892 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCA 19833 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | || || ||||||||||| || |||||||||||| ||| || ||| Sbjct 19832 GCAAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTC 19773 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||||| || ||||||| ||| | ||| ||||| || ||||| Sbjct 19772 ACGTTG-TCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGT 19714 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 19713 CTTCACGAAGATCTGCAT 19696 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || |||||||| || | ||||| ||| || ||||| || || Sbjct 19664 GTAGACTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 19605 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | |||||||| || || || ||||| || |||||||||||| ||| ||| |||| Sbjct 19604 GCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 19545 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | |||||| |||| ||| | || |||||||| || || Sbjct 19544 ACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTGCCGGTAAGGGTC 19485 Query 127097 TTTAC 127101 || || Sbjct 19484 TTGAC 19480 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | |||||| ||| || ||||| || ||| Sbjct 20120 GTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCAAGCTGCTTGCCA 20061 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | |||||||||||||| || || || ||||||||| || ||| ||| Sbjct 20060 GCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCTTCCTTGTCCTGAATCTTCGACTTC 20001 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| |||| | || || |||| || | || ||||| || || || Sbjct 20000 ACATTGTCGATGGTATCCGAAGATTCAACCTCGAGCGTAATAGTCTTGCCAGTAAGGGTC 19941 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 19940 TTGACAAAGATCTGCAT 19924 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || ||||||||||| || | ||||| || || ||||| |||||| Sbjct 19356 GTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCA 19297 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | |||| |||||||| ||||| || ||||||||||||||| || ||| |||| Sbjct 19296 GCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 19237 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| |||| || || | |||||| || | || | || |||||||| Sbjct 19236 ACGTTG-TCGATAGTATCAGAGGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 19184 >seq1408 Length=106487 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| || || ||||| || || Sbjct 91075 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 91134 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 91135 GCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 91194 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||||| |||||| |||| ||| | ||||| || || || || Sbjct 91195 ACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTAATGGTTTTACCCGTTAGGGTC 91254 Query 127097 TTTACAAAAATCTGCATG 127114 || || || || |||||| Sbjct 91255 TTGACGAAGATTTGCATG 91272 >seq808 Length=275957 Score = 91.5 bits (100), Expect = 1e-13 Identities = 283/437 (65%), Gaps = 11/437 (3%) Strand=Plus/Minus Query 47146 TCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACA 47205 |||| ||||| ||||||||| |||||||| || |||||| | || || | Sbjct 155291 TCGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTTCTGGC 155232 Query 47206 TGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACG 47265 | || | || | ||||| || ||||| || ||| ||||| ||||| | || | Sbjct 155231 TCAAGAAGCGTGGCCTCATGCCTGGTCTCACCTTCTCCAATGAGCTCATCTCTCGTGATG 155172 Query 47266 AAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAGTTG- 47324 | || || |||||| |||| || ||||||| | | | | || |||| | Sbjct 155171 AGGGTCTTCACACCGACTTCGCGTGTCTCTTGTTC-----TCGCATC--TCAAGCACCGC 155119 Query 47325 ---GACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTT 47381 ||| || | ||| ||||| || |||| |||||| || ||| |||||| Sbjct 155118 CCCGACAAGCAGCTCATCAAGGACATCATTACCGATGCCGTCAAGATCGAGCAGGAGTTC 155059 Query 47382 TTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTAC 47441 || | |||||||| || | | | || ||||||||| | | |||| ||||| Sbjct 155058 CTCACTGAGGCTCTCCCTTGCGCCCTGCTCGGCATGAACGCGAACCTCATGAAGCAGTAC 154999 Query 47442 ATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACC 47501 || || || ||||||||| | || || || || || ||||| ||| || Sbjct 154998 ATTGAGTTCGTCGCCGACAGGCTACTTGTCGCTCTCGGCAATGAGAAGATCTACAGGTCC 154939 Query 47502 GAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAG 47561 || || ||||| || ||| | ||||| || |||| |||||||||||||| |||||| Sbjct 154938 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAG 154879 Query 47562 AAGCGCGTCGGCGAATA 47578 ||||| || || || || Sbjct 154878 AAGCGTGTTGGTGACTA 154862 >seq954 Length=26895 Score = 84.2 bits (92), Expect = 2e-11 Identities = 233/348 (67%), Gaps = 16/348 (5%) Strand=Plus/Plus Query 147220 AGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATG 147279 || |||| || ||| ||| || ||||||| ||| | | || ||| | || || Sbjct 24792 AGGCCGATGCCGCCGGCCATTTTTGAAATCATTGCGCATGTCTTCAGGGTGTCATAAATT 24851 Query 147280 CCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGACGACAC 147339 || ||||| || || ||||| ||| | ||||| |||||| ||| |||| | Sbjct 24852 CCCTCGATACTATCATCCTTCATGTCTACGAGGAAGCACGAAGACAGCTGGGCTTGGGGT 24911 Query 147340 GTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG---TGCCCAGACTCATCA-A 147395 ||||| || ||| || ||||| ||||| ||||| || | ||| || | | Sbjct 24912 GTGCCGGCGTTAAAGAGAGTGGGTGAAGCGTGTGTGAAAAATTTGGAC-GAC--ATGAGA 24968 Query 147396 TTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCAT 147455 ||| ||||||||||| | | | |||||||||||| ||| | | |||||| ||||| Sbjct 24969 TTG-TACGTTTCAATCACACGCTCAACGTCATCGCCCCAAATACCGACGGCGACACGCAT 25027 Query 147456 GAGCATGTGCTGGGGTCGTTCCGCAA---TCACGTCATTGACTTTTAATAGATATCCATT 147512 | ||||||||| ||||| || ||| || ||||| | ||| | || || | || Sbjct 25028 AATCATGTGCTGAGGTCGCTCGACAATCTTCCCGTCA---AGTTTCAGGAGGTA-CGATC 25083 Query 147513 GGTC-AGAGTTTTGAAACCAAAGTACTTGTAGTCGTAGTCCCTGTTGT 147559 | || || || ||||| || ||||| | ||| | | | ||||||| || Sbjct 25084 GTTCGAGTGTCTTGAAGCCGAAGTATTGGTAATTGAAATCCCTGTCGT 25131 >seq2 Length=228398 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || |||||||||||||| | ||||| ||| || ||||| ||||| ||| | || Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| ||||| || || |||||||| ||| || || ||| | | ||| Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | ||||||| |||||| || | ||| | || ||||| || || || || |||||| Sbjct 5469 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAA 5410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475491385084160