Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq910 141 2e-28 seq1408 111 4e-19 seq2 104 6e-17 >seq910 Length=30028 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||||||||||| || |||||||| || | |||||| |||| | || Sbjct 19916 CGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTG 19857 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| || || ||||||||||| || || || ||| ||| || Sbjct 19856 CGGCCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACCC 19797 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||||||| |||| |||||| | || ||| || || | Sbjct 19796 TCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGG 19737 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || ||||| ||||| || || || Sbjct 19736 GTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTG 19699 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||||| ||||| || |||||||| |||| |||||| |||| | ||| Sbjct 20144 CGAAGGCGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTG 20085 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || ||||| |||||||||||||| || || ||||||| Sbjct 20084 CGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCT 20025 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| |||| ||| || | | ||| || || | | Sbjct 20024 TCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAGC 19965 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || ||||| || || Sbjct 19964 GTAATAGTCTTGCCAGTAAGGGTCTTGACAAAGATCTG 19927 Score = 104 bits (114), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| |||||||| |||||||| || | |||||||||| | || Sbjct 19380 CGAAGGCGGAGAACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTG 19321 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || ||||||||||| ||||| || || ||||||||||| || || || Sbjct 19320 CGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCC 19261 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| |||| || || | | || || ||||| Sbjct 19260 TCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTATCAGAGGACTCGACCTCCAAA 19201 Query 199589 GTGATCGTCTTACCCGT 199605 ||||| ||||| || || Sbjct 19200 GTGATGGTCTTGCCGGT 19184 >seq1408 Length=106487 Score = 111 bits (122), Expect = 4e-19 Identities = 164/232 (71%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| || |||||||| |||| ||||||||| | | || Sbjct 91051 CGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 91110 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| || ||||||||||| || || || Sbjct 91111 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCC 91170 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| ||||| | | || || || | Sbjct 91171 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGG 91230 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCT 199640 || || || |||||||| || || || || || ||||| ||| || |||| Sbjct 91231 GTAATGGTTTTACCCGTTAGGGTCTTGACGAAGATTTG---CATGTTTGCCT 91279 >seq2 Length=228398 Score = 104 bits (114), Expect = 6e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| || | ||||| |||| | || | ||||| || ||||||||||||||||| | Sbjct 5591 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 5532 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | |||||||||||||| || ||||| || ||||||||||| |||||| | Sbjct 5531 TAAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGT 5472 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| ||||| | | || || || | ||||| ||||| |||||||| || || |||| Sbjct 5471 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAA 5412 Query 199620 AA 199621 || Sbjct 5411 AA 5410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178897673786128