Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq910 141 2e-28
seq1408 111 4e-19
seq2 104 6e-17
>seq910
Length=30028
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | |||||||||||||| || |||||||| || | |||||| |||| | ||
Sbjct 19916 CGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTG 19857
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| |||||||| || || ||||||||||| || || || ||| ||| ||
Sbjct 19856 CGGCCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACCC 19797
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||||||| |||| |||||| | || ||| || || |
Sbjct 19796 TCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGG 19737
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| || || ||||| ||||| || || ||
Sbjct 19736 GTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTG 19699
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | |||||||| ||||| || |||||||| |||| |||||| |||| | |||
Sbjct 20144 CGAAGGCGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTG 20085
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || ||||| |||||||||||||| || || |||||||
Sbjct 20084 CGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCT 20025
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| |||||| |||| ||| || | | ||| || || | |
Sbjct 20024 TCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAGC 19965
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || ||||| || ||
Sbjct 19964 GTAATAGTCTTGCCAGTAAGGGTCTTGACAAAGATCTG 19927
Score = 104 bits (114), Expect = 6e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || ||||| |||||||| |||||||| || | |||||||||| | ||
Sbjct 19380 CGAAGGCGGAGAACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTG 19321
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || ||||||||||| ||||| || || ||||||||||| || || ||
Sbjct 19320 CGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCC 19261
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| |||| || || | | || || |||||
Sbjct 19260 TCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTATCAGAGGACTCGACCTCCAAA 19201
Query 199589 GTGATCGTCTTACCCGT 199605
||||| ||||| || ||
Sbjct 19200 GTGATGGTCTTGCCGGT 19184
>seq1408
Length=106487
Score = 111 bits (122), Expect = 4e-19
Identities = 164/232 (71%), Gaps = 3/232 (1%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| |||||||| || |||||||| |||| ||||||||| | | ||
Sbjct 91051 CGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 91110
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||| ||||||||||| || ||||||||||| || || ||
Sbjct 91111 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCC 91170
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || |||| ||||| | | || || || |
Sbjct 91171 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGG 91230
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCT 199640
|| || || |||||||| || || || || || ||||| ||| || ||||
Sbjct 91231 GTAATGGTTTTACCCGTTAGGGTCTTGACGAAGATTTG---CATGTTTGCCT 91279
>seq2
Length=228398
Score = 104 bits (114), Expect = 6e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| || | ||||| |||| | || | ||||| || ||||||||||||||||| |
Sbjct 5591 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 5532
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| |||||||||||||| || ||||| || ||||||||||| |||||| |
Sbjct 5531 TAAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGT 5472
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||| | | || || || | ||||| ||||| |||||||| || || ||||
Sbjct 5471 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAA 5412
Query 199620 AA 199621
||
Sbjct 5411 AA 5410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178897673786128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |