Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1408 150 2e-31 seq910 122 1e-22 seq2 96.9 4e-15 >seq1408 Length=106487 Score = 150 bits (166), Expect = 2e-31 Identities = 153/198 (77%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 91080 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 91139 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||||||| |||||| ||||| | Sbjct 91140 GATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 91199 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || || | || |||||||| ||||| || || || || Sbjct 91200 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTAATGGTTTTACCCGTTAGGGTCTTGAC 91259 Query 46582 AAAGATTTGCAT-TTTGC 46598 ||||||||||| ||||| Sbjct 91260 GAAGATTTGCATGTTTGC 91277 >seq910 Length=30028 Score = 122 bits (134), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| |||||||||||||| || || ||||| | || ||| Sbjct 19676 ACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCATCCTCG 19617 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| ||||| || || ||||| | || | | |||||||||| | Sbjct 19616 AGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGG 19557 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||||| | | | |||||| ||| || || || | || ||||| ||| Sbjct 19556 ATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTG 19497 Query 46565 CCCGTCAGCGTTTTAAC 46581 || || || || || || Sbjct 19496 CCGGTAAGGGTCTTGAC 19480 Score = 116 bits (128), Expect = 4e-21 Identities = 139/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| || ||||||||||| || || ||||| |||| || Sbjct 19368 ACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCCTCA 19309 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || ||||| |||| |||||||||||||| || | || |||||||||| Sbjct 19308 AGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 19249 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| ||| | | | || || || || || |||| |||||||| || Sbjct 19248 ATCTTCGACTTGA-CGTTGTCGATAGTATCAGAGGACTCGACCTCCAAAGTGATGGTCTT 19190 Query 46564 GCCCGT 46569 ||| || Sbjct 19189 GCCGGT 19184 Score = 102 bits (112), Expect = 9e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| ||||| ||||| || || |||||||| | || || Sbjct 20132 ACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCA 20073 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| || | |||||||| |||| || | | ||||||||| Sbjct 20072 AGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCTTCCTTGTCCTGA 20013 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | || || ||||| || || | ||| || || ||| Sbjct 20012 ATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAGCGTAATAGTCTTG 19953 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || |||||||| ||||| Sbjct 19952 CCAGTAAGGGTCTTGACAAAGATCTGCAT 19924 >seq2 Length=228398 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| || |||||||| || || || ||||| | || ||||||||||| |||||||| | Sbjct 5591 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 5532 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 | | ||||||||||||| || | | |||||| ||| ||||| ||| | | Sbjct 5531 TAAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGT 5472 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| || || || || | |||||||| |||||||| || || || |||| Sbjct 5471 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAA 5412 Query 46584 A 46584 | Sbjct 5411 A 5411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565227208279680