Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq808 168 7e-37
seq1408 132 5e-26
seq2 87.8 2e-12
seq910 86.0 6e-12
>seq808
Length=275957
Score = 168 bits (186), Expect = 7e-37
Identities = 331/481 (69%), Gaps = 10/481 (2%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || || || | | ||| ||| | ||| || || |||||||||
Sbjct 154877 TTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 154936
Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | ||||| ||| |||||| || |||| || ||||||||||| ||||||
Sbjct 154937 GTGGACCTGTAGATCTTCTCATTGCCGAG-AG--CGACAAGTAGCCTGTCGGCGACGAAC 154993
Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTT 132799
|| ||||| ||| |||| | ||||| | | | || ||||| |||| || || || |
Sbjct 154994 TCAATGTACTGCTTCATGAGGTTCGCGTTCATG-CCGAGCAGGGCGCAAGGG-AGAGCCT 155051
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859
| ||||| || |||||||| ||| || ||||| | ||| ||| | | | || |
Sbjct 155052 CAGTGAGGAACTCCTGCTCGATCTTGACGGCATCGGTAATGATGTCCTTGATGAGCTGCT 155111
Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919
| || || ||| | |||| ||||| | || || |||||| || | ||||
Sbjct 155112 TGTCGGGGCGGTGCTTGAGATGCGAGAACAAGAGACACGCGAAGTCGGTGTGAAGACCCT 155171
Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979
| || | || ||||| || ||| ||| || | || ||||||||||| || || ||||
Sbjct 155172 CATCACGAGAGATGAGCTCATTGGAGAAGGTGAGACCAGGCATGAGGCCACGCTTCTTGA 155231
Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039
|||| || |||| ||| || || ||||||| ||||||||||| ||||| || |
Sbjct 155232 GCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAGGCGA 155291
Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099
| ||||||| |||| ||||| || | |||||||| ||||| ||||| |||||||
Sbjct 155292 CGAGGCGCTGAGCGAAGGTGGCCTCGCGGTCAGCGATCCATCGCAGAGCCCAGTCGGCCT 155351
Query 133100 T 133100
|
Sbjct 155352 T 155352
Score = 129 bits (142), Expect = 6e-25
Identities = 199/278 (72%), Gaps = 7/278 (3%)
Strand=Plus/Plus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||| || |||||| || || | || ||||| | ||||||||| ||| || ||
Sbjct 155498 GTAGGTATCAATGAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 155557
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285
||||| ||||| || ||||| | ||| || || | || ||| ||||| || || |
Sbjct 155558 ACCGTAGAAGCAGCGGGCCTCAGGAATCTGGACCTCG-GCGCTGAATCGCTCAACGAGGT 155616
Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345
| |||||||||||||||||| |||||||| ||||| || | ||| ||||||||
Sbjct 155617 TCTCGTTGACGATGCCGTCGGAAGCGGCGAAGAAGGCAAGAATGTGAGAGATGAAATACT 155676
Query 133346 GCTCGTTGTCGTTCAAGC--GCT--CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCC 133401
||||| || || ||| | | |||||||| | |||||||| || || | ||||
Sbjct 155677 TCTCGTCATCATT-GAGCTTGTTACCCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCC 155735
Query 133402 TCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| | ||||| || || || ||||| || ||||||||
Sbjct 155736 TCAGCAGTCCAGAAAGAGGCTTCGGCCTTCTTGTACAT 155773
>seq1408
Length=106487
Score = 132 bits (146), Expect = 5e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| |||||||| ||||| || || || ||||| |||||||| ||| |||| |||||| |
Sbjct 91275 AAACATGCAAATCTTCGTCAAGACCCTAACGGGTAAAACCATTACCCTCGAGGTCGAGTC 91216
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| | |||| | | | | || || |||| ||||| ||||| || ||| | ||
Sbjct 91215 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 91156
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || || | ||| ||||| ||||| || |||| ||||||||| ||||||
Sbjct 91155 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 91096
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| ||||| | || || || | || || ||| | | |||||
Sbjct 91095 CAACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTTCGCGGCGG 91045
>seq2
Length=228398
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
|| || || || ||||||||||| ||||||||| | || |||||| || | |||| |
Sbjct 5411 TTTGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 5470
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || || | || || |||||||| ||| ||||||| ||||| ||
Sbjct 5471 GACAATGTGAAGTCCAAGATTCAGGATAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTT 5530
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|||| ||| || || ||||| || || | |||||||| || ||||| || || |||
Sbjct 5531 ATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAAG 5590
Query 38433 G 38433
|
Sbjct 5591 G 5591
>seq910
Length=30028
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| || ||||||||| |||| || ||||| ||||||| ||| ||||| ||||| ||
Sbjct 20017 GACAAGGAAGGAATTCCCCCCGATCAGCAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAG 20076
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|| | ||||| || || ||||||||||| ||||| | || || ||| | || ||
Sbjct 20077 GATGGTCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCCACACTCCATCTTGTCCTC 20136
Query 38457 CG 38458
||
Sbjct 20137 CG 20138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500162896578560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |