Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq808 168 7e-37 seq1408 132 5e-26 seq2 87.8 2e-12 seq910 86.0 6e-12 >seq808 Length=275957 Score = 168 bits (186), Expect = 7e-37 Identities = 331/481 (69%), Gaps = 10/481 (2%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | ||| ||| | ||| || || ||||||||| Sbjct 154877 TTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 154936 Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||||| ||| |||||| || |||| || ||||||||||| |||||| Sbjct 154937 GTGGACCTGTAGATCTTCTCATTGCCGAG-AG--CGACAAGTAGCCTGTCGGCGACGAAC 154993 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTT 132799 || ||||| ||| |||| | ||||| | | | || ||||| |||| || || || | Sbjct 154994 TCAATGTACTGCTTCATGAGGTTCGCGTTCATG-CCGAGCAGGGCGCAAGGG-AGAGCCT 155051 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 | ||||| || |||||||| ||| || ||||| | ||| ||| | | | || | Sbjct 155052 CAGTGAGGAACTCCTGCTCGATCTTGACGGCATCGGTAATGATGTCCTTGATGAGCTGCT 155111 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 | || || ||| | |||| ||||| | || || |||||| || | |||| Sbjct 155112 TGTCGGGGCGGTGCTTGAGATGCGAGAACAAGAGACACGCGAAGTCGGTGTGAAGACCCT 155171 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 | || | || ||||| || ||| ||| || | || ||||||||||| || || |||| Sbjct 155172 CATCACGAGAGATGAGCTCATTGGAGAAGGTGAGACCAGGCATGAGGCCACGCTTCTTGA 155231 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| ||| || || ||||||| ||||||||||| ||||| || | Sbjct 155232 GCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAGGCGA 155291 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 | ||||||| |||| ||||| || | |||||||| ||||| ||||| ||||||| Sbjct 155292 CGAGGCGCTGAGCGAAGGTGGCCTCGCGGTCAGCGATCCATCGCAGAGCCCAGTCGGCCT 155351 Query 133100 T 133100 | Sbjct 155352 T 155352 Score = 129 bits (142), Expect = 6e-25 Identities = 199/278 (72%), Gaps = 7/278 (3%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| || |||||| || || | || ||||| | ||||||||| ||| || || Sbjct 155498 GTAGGTATCAATGAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 155557 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 ||||| ||||| || ||||| | ||| || || | || ||| ||||| || || | Sbjct 155558 ACCGTAGAAGCAGCGGGCCTCAGGAATCTGGACCTCG-GCGCTGAATCGCTCAACGAGGT 155616 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | |||||||||||||||||| |||||||| ||||| || | ||| |||||||| Sbjct 155617 TCTCGTTGACGATGCCGTCGGAAGCGGCGAAGAAGGCAAGAATGTGAGAGATGAAATACT 155676 Query 133346 GCTCGTTGTCGTTCAAGC--GCT--CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCC 133401 ||||| || || ||| | | |||||||| | |||||||| || || | |||| Sbjct 155677 TCTCGTCATCATT-GAGCTTGTTACCCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCC 155735 Query 133402 TCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || | ||||| || || || ||||| || |||||||| Sbjct 155736 TCAGCAGTCCAGAAAGAGGCTTCGGCCTTCTTGTACAT 155773 >seq1408 Length=106487 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| ||||| || || || ||||| |||||||| ||| |||| |||||| | Sbjct 91275 AAACATGCAAATCTTCGTCAAGACCCTAACGGGTAAAACCATTACCCTCGAGGTCGAGTC 91216 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | | |||| | | | | || || |||| ||||| ||||| || ||| | || Sbjct 91215 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 91156 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| || || | ||| ||||| ||||| || |||| ||||||||| |||||| Sbjct 91155 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 91096 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| ||||| | || || || | || || ||| | | ||||| Sbjct 91095 CAACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTTCGCGGCGG 91045 >seq2 Length=228398 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 || || || || ||||||||||| ||||||||| | || |||||| || | |||| | Sbjct 5411 TTTGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 5470 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || || | || || |||||||| ||| ||||||| ||||| || Sbjct 5471 GACAATGTGAAGTCCAAGATTCAGGATAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTT 5530 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| ||| || || ||||| || || | |||||||| || ||||| || || ||| Sbjct 5531 ATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAAG 5590 Query 38433 G 38433 | Sbjct 5591 G 5591 >seq910 Length=30028 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || ||||||||| |||| || ||||| ||||||| ||| ||||| ||||| || Sbjct 20017 GACAAGGAAGGAATTCCCCCCGATCAGCAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAG 20076 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | ||||| || || ||||||||||| ||||| | || || ||| | || || Sbjct 20077 GATGGTCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCCACACTCCATCTTGTCCTC 20136 Query 38457 CG 38458 || Sbjct 20137 CG 20138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500162896578560