Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1285 87.8 2e-12 seq25 86.0 7e-12 >seq1285 Length=8709 Score = 87.8 bits (96), Expect = 2e-12 Identities = 311/479 (65%), Gaps = 33/479 (7%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||||||||||||||| ||| ||||| | || |||| | | |||| ||||| Sbjct 1363 CGATCGAAACGACCTGGTCGGGTGAGAGCCTTGTCGAGAAGCTGAGGATGGTTAGTAGCC 1422 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 || | ||| | | || || | | ||||| ||||| | || || | |||||||| Sbjct 1423 GCGAGGACGATGACACCGGTATTCTGCTCGAATCCGTCGAGCTCCGTCAAGAGCTGGTTC 1482 Query 11623 ATCGTCTG-TTCA----CGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTTAC 11677 | ||||| |||| |||| ||| | || | | | | | ||| | Sbjct 1483 AGGGTCTGCTTCATATACGCTG--CGTCGC-GGACGTTTCGCTTTCCG-----------C 1528 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGG------TTGGTTGGCACGTGCCT 11731 ||| ||||| | ||| |||||||| | ||| | || || |||||| ||| Sbjct 1529 CGATGGCGTCCAACTCGTCGATGAAGATGATCGAGGGAGACTTTTCCTTGGCA---GCC- 1584 Query 11732 GTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG 11791 || ||| || || || || ||||| || || ||||| ||||| ||||| | || | | Sbjct 1585 GT--GAAGAGATCGCGAACTCGCTTAGCACCGACACCGACGAAGATCTCGTCAAACTC-G 1641 Query 11792 CGGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGA 11850 | || | ||| | | |||||| || |||||| || || | |||||||| || || Sbjct 1642 CTGCCGGACATGTAGAAGAAGGGGACGCCAGACTCTCCGGCAACAGCTCGAGCAAGAAGC 1701 Query 11851 GTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTT 11910 ||||| || |||||||| | || |||||||| | || ||| | ||| |||| Sbjct 1702 GTCTTTCCGGTACCAGGAGGGCCGACGAGAAGGACACCCTTGGGCAGCTTTCCACCGAGA 1761 Query 11911 CCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || | || || || ||||| | ||| || |||| ||| |||||||||||| || Sbjct 1762 GTCGAGAACCGGTCGGGATTCTTCAAGAACTCGACAACTTCCAAAAGTTCCTCCTTAGC 1820 >seq25 Length=97588 Score = 86.0 bits (94), Expect = 7e-12 Identities = 212/318 (67%), Gaps = 8/318 (3%) Strand=Plus/Minus Query 11683 GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGT 11742 ||||| || || ||||| || | ||| || || ||| || ||| |||| || Sbjct 46916 GCGTCGATTTCGTCGATAAAGATGATGCAAGGAGCGTTCTTCCGCGCCGTCGCGAACAGG 46857 Query 11743 TCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA-ACA 11801 || ||||| || | || ||||| || |||||||| ||||| | | || || Sbjct 46856 TCTCGTACTCGGGATGGACCGACACCAACAAACATCTCCACGAACTCCGATCCACTGACG 46797 Query 11802 CTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGT 11861 ||||| |||||| | | | |||| || || |||| || || ||||||||||| || Sbjct 46796 CTGAAGAAAGGGACC-TCACACTCGCCGGCCGTGGCCTTGGCAAGAAGAGTCTTACCGGT 46738 Query 11862 ACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---ACTTCCAAAGTA 11918 ||| || | || || |||| ||| || |||||||| |||||||| |||| || | Sbjct 46737 ACCGGGGGGGCCGGCCAGAATGGCACCGCGGGGGATTTTGGCACCGAGTCTTCGGAATT- 46679 Query 11919 GCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGAT 11978 ||| || ||||||||||| || | |||| | ||| ||||||| ||| || Sbjct 46678 --TCTCGGGGGTCTTGAGGAAGCTGACGAACTCCATGATTTCTACCTTGGCCTCGTCCAT 46621 Query 11979 ACCCTCAACATCGGTGAA 11996 ||| | || || | ||| Sbjct 46620 GCCCGCGACGTCCGAGAA 46603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588964338275200