Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq910 96.9 3e-14
>seq910
Length=30028
Score = 96.9 bits (106), Expect = 3e-14
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| ||||| || ||||| || || ||| |||||||||| || || |
Sbjct 19913 AGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGG 19854
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
||||||||| || || || ||||| || || | ||| ||||| |||||||| || ||
Sbjct 19853 CCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCC 19794
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435
|| || || || || || || || || || || | ||| | | |||||| ||
Sbjct 19793 TTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGA-TGATTCAACTTCGAGGGT 19735
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| || || ||||||||||| || ||||| || ||||||
Sbjct 19734 AATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCATA 19695
Score = 91.5 bits (100), Expect = 1e-12
Identities = 156/222 (70%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|| ||||| |||||||| || || ||| | ||| || |||||||||| ||||| |
Sbjct 20141 AGGCGGAGGACAAGATGGAGTGTGGACTCCTTCTGG--ATGTTGTAATCAGAAAGAGTGC 20084
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
||| ||||| || || || || ||||| || | |||||||| || ||||||||||
Sbjct 20083 GACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCTT 20024
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGA 563433
| || || ||||| || || || || || ||||| | || | | |||||
Sbjct 20023 CCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCG-AAGATTCAACCTCGAGC 19965
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|||| ||| || |||||||| || || || || || ||||||
Sbjct 19964 GTAATAGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCATA 19923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029212230936160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |