Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq910 96.9 3e-14 >seq910 Length=30028 Score = 96.9 bits (106), Expect = 3e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||| || ||||| || || ||| |||||||||| || || | Sbjct 19913 AGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGG 19854 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||| || || || ||||| || || | ||| ||||| |||||||| || || Sbjct 19853 CCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCC 19794 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || || || || || || || || || || || | ||| | | |||||| || Sbjct 19793 TTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGA-TGATTCAACTTCGAGGGT 19735 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || || ||||||||||| || ||||| || |||||| Sbjct 19734 AATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCATA 19695 Score = 91.5 bits (100), Expect = 1e-12 Identities = 156/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 || ||||| |||||||| || || ||| | ||| || |||||||||| ||||| | Sbjct 20141 AGGCGGAGGACAAGATGGAGTGTGGACTCCTTCTGG--ATGTTGTAATCAGAAAGAGTGC 20084 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||| ||||| || || || || ||||| || | |||||||| || |||||||||| Sbjct 20083 GACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCTT 20024 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGA 563433 | || || ||||| || || || || || ||||| | || | | ||||| Sbjct 20023 CCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCG-AAGATTCAACCTCGAGC 19965 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| ||| || |||||||| || || || || || |||||| Sbjct 19964 GTAATAGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCATA 19923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029212230936160