Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq113 105 5e-18 >seq113 Length=223936 Score = 105 bits (116), Expect = 5e-18 Identities = 198/290 (68%), Gaps = 7/290 (2%) Strand=Plus/Plus Query 29685 ATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCAC 29744 ||| ||||| || |||| || ||||||||||||| | |||| | | |||| | Sbjct 124780 ATGTGGGTCATAGCCCTTCACCACAAAATCCTCTGCCTGCCATCCGTCAA--TGCTCCCC 124837 Query 29745 CCT-----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTC 29799 ||| ||| | ||| ||||| || ||| | ||||| | || ||||| | | Sbjct 124838 CCTTTCTCCCTCGTAATCTCGAGTGTCGGGAAGTCGCGTGGCTCGCGTTCTAGCTGCGAC 124897 Query 29800 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCT 29859 |||| | || ||||| || || || ||||| |||||||||| | ||| |||| | Sbjct 124898 CTCAGAGCATCGACGTGGTCTAGATATACGTGGGCGTCTCCCAAGACGTGCGTAAACGTT 124957 Query 29860 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 29919 || || | || || ||| || || ||||| | || | | | |||||| |||||| Sbjct 124958 CCTGGGACCAGGTCGCAGACATGCGCGATCATATGTGTTAATAAGGCGTAGCTAGCGATG 125017 Query 29920 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 || ||||| ||||| || |||||||| | || |||||||| ||||| || Sbjct 125018 TTGAAGGGAACCCCAAGGCCCATGTCGCAAGATCTCTGGTACAGCTGGCA 125067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408609711637232