Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq808 109 1e-18
>seq808
Length=275957
Score = 109 bits (120), Expect = 1e-18
Identities = 292/449 (65%), Gaps = 11/449 (2%)
Strand=Plus/Minus
Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936
|||| || || ||||| ||||| || ||||| ||||| ||||||||| | ||||| |||
Sbjct 155300 AGCGCCTCGTCGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCA 155241
Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996
| |||||||||||| || || |||||| || || ||| ||||| |||||||||
Sbjct 155240 TTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACCTTCTCCAATGAGCTCATCT 155181
Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056
| || |||||||| |||| || || || || || | | | || | | || ||
Sbjct 155180 CTCGTGATGAGGGTCTTCACACCGACTTCGCGTGTCTCTTGTTCTCGCATCTCAAGCACC 155121
Query 26057 ACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115
|| |||| || | || | ||||| | || || || |||||||| ||
Sbjct 155120 ----GCCCCGACAAGCAGCTCATCAAGGACATCATTACCGATGCCGTCAAGATCGAGCAG 155065
Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175
||||| | | ||||||||| | |||||||
Sbjct 155064 GAGTTCCTCACTGAGGCTCTCCCTTGCGCCCTGCTCGGCATGAACGCGAACCTCATGAAG 155005
Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCT---GGGACTCGCCAGACTC 26232
|| |||||||||| || |||||| || || || | ||| || | | ||| ||
Sbjct 155004 CAGTACATTGAGTTCGTCGCCGACAGGCTACT-TGTC-GCTCTCGGCAATGAGAAGA-TC 154948
Query 26233 TACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAAC 26292
||||| | | ||||| |||||||| ||||| ||||| || | | || |||||||||
Sbjct 154947 TACAGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAAC 154888
Query 26293 TTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
||||| || ||| | || || ||||| ||
Sbjct 154887 TTCTTCGAGAAGCGTGTTGGTGACTACCA 154859
Score = 87.8 bits (96), Expect = 3e-12
Identities = 163/236 (69%), Gaps = 9/236 (4%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| || ||| |||||| || || |||||||||||
Sbjct 155782 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTCTGGACTGCTGAGGAGATTGATCTC 155723
Query 25537 GCCAAGGACATGGACGGCTGG-----TACGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591
||||||| | ||| |||| | |||| || | |||||| || |||| ||
Sbjct 155722 TCCAAGGATCTCCACGACTGGGGTAACAAGCTCAAT--GATGACGAGAAGTATTTCATCT 155665
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
|| | | || ||||| || || || || || || || |||||||| || |||
Sbjct 155664 CTCACATTCTTGCCTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTCGTTGAGC 155605
Query 25652 GATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||||| | || || ||| | | | |||||| || |||||||||||||||||
Sbjct 155604 GATTCAGCGCCGAGGTCCAGATTCCT-GAGGCCCGCTGCTTCTACGGTTTCCAGAT 155550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928826408872960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |