Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq808 109 1e-18 >seq808 Length=275957 Score = 109 bits (120), Expect = 1e-18 Identities = 292/449 (65%), Gaps = 11/449 (2%) Strand=Plus/Minus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || ||||| ||||| || ||||| ||||| ||||||||| | ||||| ||| Sbjct 155300 AGCGCCTCGTCGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCA 155241 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 | |||||||||||| || || |||||| || || ||| ||||| ||||||||| Sbjct 155240 TTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACCTTCTCCAATGAGCTCATCT 155181 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | || |||||||| |||| || || || || || | | | || | | || || Sbjct 155180 CTCGTGATGAGGGTCTTCACACCGACTTCGCGTGTCTCTTGTTCTCGCATCTCAAGCACC 155121 Query 26057 ACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || |||| || | || | ||||| | || || || |||||||| || Sbjct 155120 ----GCCCCGACAAGCAGCTCATCAAGGACATCATTACCGATGCCGTCAAGATCGAGCAG 155065 Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175 ||||| | | ||||||||| | ||||||| Sbjct 155064 GAGTTCCTCACTGAGGCTCTCCCTTGCGCCCTGCTCGGCATGAACGCGAACCTCATGAAG 155005 Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCT---GGGACTCGCCAGACTC 26232 || |||||||||| || |||||| || || || | ||| || | | ||| || Sbjct 155004 CAGTACATTGAGTTCGTCGCCGACAGGCTACT-TGTC-GCTCTCGGCAATGAGAAGA-TC 154948 Query 26233 TACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAAC 26292 ||||| | | ||||| |||||||| ||||| ||||| || | | || ||||||||| Sbjct 154947 TACAGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAAC 154888 Query 26293 TTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 ||||| || ||| | || || ||||| || Sbjct 154887 TTCTTCGAGAAGCGTGTTGGTGACTACCA 154859 Score = 87.8 bits (96), Expect = 3e-12 Identities = 163/236 (69%), Gaps = 9/236 (4%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| || ||| |||||| || || ||||||||||| Sbjct 155782 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTCTGGACTGCTGAGGAGATTGATCTC 155723 Query 25537 GCCAAGGACATGGACGGCTGG-----TACGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||||||| | ||| |||| | |||| || | |||||| || |||| || Sbjct 155722 TCCAAGGATCTCCACGACTGGGGTAACAAGCTCAAT--GATGACGAGAAGTATTTCATCT 155665 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 || | | || ||||| || || || || || || || |||||||| || ||| Sbjct 155664 CTCACATTCTTGCCTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTCGTTGAGC 155605 Query 25652 GATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||||| | || || ||| | | | |||||| || ||||||||||||||||| Sbjct 155604 GATTCAGCGCCGAGGTCCAGATTCCT-GAGGCCCGCTGCTTCTACGGTTTCCAGAT 155550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928826408872960