Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq954 123 7e-23 seq1363 122 3e-22 >seq954 Length=26895 Score = 123 bits (136), Expect = 7e-23 Identities = 349/534 (65%), Gaps = 3/534 (1%) Strand=Plus/Plus Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 ||| || | |||||||||||| || || || ||||| || | ||| | || ||| Sbjct 24575 CTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAACTCGAATACATCTGCGTGCCATGG 24634 Query 156029 CTCCAGATACATAGCAAA-ACTAC--CATTCCTCTTGCCACCCTGATCTACATACCGAGC 156085 ||| || || || ||||| || | | | || |||||||| || || |||| || Sbjct 24635 CTCAAGGTAGATGGCAAAGGCTCCGGGGCGCTTATTACCACCCTGGTCAACGTACCTGGC 24694 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 || || |||||||||| ||||| |||||||| || ||||| || || || || || Sbjct 24695 GGTGTTGTTGAAGACACGAAGCATCGGAATAATGCCGTTGGATGTTCCGTTTGTCCCCGC 24754 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205 ||||| || || | | |||| |||||| | || || || || || | | ||| Sbjct 24755 AATATATGAGCCCGTGGCACGAATGCGATGAATGTTGAGGCCGATGCCGCCGGCCATTTT 24814 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 ||||| |||||| ||| | || | |||| || || ||| |||||| | ||| Sbjct 24815 TGAAATCATTGCGCATGTCTTCAGGGTGTCATAAATTCCCTCGATACTATCATCCTTCAT 24874 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 || || |||||||| | || | | | ||||| || ||||| || || || || Sbjct 24875 GTCTACGAGGAAGCACGAAGACAGCTGGGCTTGGGGTGTGCCGGCGTTAAAGAGAGTGGG 24934 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385 || || || | ||| | || ||||| || ||| || || | | ||||| Sbjct 24935 TGAAGCGTGTGTGAAAAATTTGGACGACATGAGATTGTACGTTTCAATCACACGCTCAAC 24994 Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445 | | || ||||| || | ||| | ||| ||| |||||||| ||||| ||||| Sbjct 24995 GTCATCGCCCCAAATACCGACGGCGACACGCATAATCATGTGCTGAGGTCGCTCGACAAT 25054 Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 | || |||| | ||| ||||| | ||||| || || || || ||||| || Sbjct 25055 CTTCCCGTCAAGTTTCAGGAGGTACGATCGTTCGAGTGTCTTGAAGCCGAAGTA 25108 >seq1363 Length=241506 Score = 122 bits (134), Expect = 3e-22 Identities = 212/306 (69%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||| |||||| |||||| | ||| |||||| | ||| | | |||||| Sbjct 84046 TTTCGGACGGTCCCATCATACTTCACGCTAACGTCTTCAAGCGCCTTCACGAGACGACGT 83987 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 || || ||||| || | ||| || || || ||||| || ||||| | | |||| || Sbjct 83986 TGGATGTAACCTGTCTCGGCTGTCTTAACTGCAGTATCGATGAGACCTTCTCTACCAGCC 83927 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTA-GCCCCCCAATAAAGGAGCTCTCAACGAA 302717 || || |||||||| | ||| || |||| | || | | | ||| |||| ||||| Sbjct 83926 ATGGCGTGGAAGAAGAACTCGGTTGG-CGTAAGACCACGGAGGTAAGAGTTCTCGACGAA 83868 Query 302718 ACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777 |||||||||||||| || | || |||||| || || || ||||| | || || | Sbjct 83867 CCCACGCGCCTCGGGGGAGTAATCATCCTTGGTGAAATGGGGTAGGGTTCGGTACTTGAA 83808 Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837 ||| | || ||||||||||| |||||| ||||||| || | | || ||||||| || Sbjct 83807 TCCGAAAGGAATACGCTTTCCTTCAACGATCTGCTGGCCGACGAGCGCCGTCATCTGGGA 83748 Query 302838 AATATT 302843 |||||| Sbjct 83747 AATATT 83742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471787729461808