Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq679 185 1e-40 seq1108 138 1e-26 seq954 122 1e-21 seq808 116 5e-20 seq903 107 2e-17 seq347 86.0 8e-11 >seq679 Length=68411 Score = 185 bits (204), Expect = 1e-40 Identities = 281/398 (71%), Gaps = 8/398 (2%) Strand=Plus/Minus Query 18092 CCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGT 18151 ||| ||| || || || ||||| || |||||| |||||||||||| | || || Sbjct 13470 CCAGCTTCGGTGAATCCCACGGCAAGGCCGTCGGGTGCATCATCGACAACCCTCCCCCCG 13411 Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211 ||||| | || |||| ||||||||||| || || | | || ||||| |||||||| Sbjct 13410 GCATGACCCTCACCGAAGCCGACATCCAACCCCAACTCAACCGCCGCCGCCCGGGCCAAA 13351 Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271 || | | | ||||| ||| |||| || ||||| | |||||| || ||||| || Sbjct 13350 GCTCCATCACGACGCCCCGCGACGAAAAGGACCGCGTAACCATCCAATCCGGCACCGAAT 13291 Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331 ||||| ||| |||||| | ||| || ||||| | || ||| |||||||| ||| Sbjct 13290 TCGGCCGCACCCTCGGCACCCCCATCAGCCTCGTCGTCATGAACGAGGACCAGCGCCCCA 13231 Query 18332 TCGACTATTCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCT 18385 ||||| | ||| | || || ||||| ||||| |||||||||| ||||| Sbjct 13230 AGGACTACGGCAACAAGACCATGGACGTCTACCCGCGCCCCTCCCACGCCGACTTCACCT 13171 Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCG-GGCGGAGGCCGGTCGTCTGCCCGCGAG 18444 || | | || |||||||||||||| | | | ||||| || || ||||||||| Sbjct 13170 ACCTCGAGAAATACGGCATCAAGGC-TAGCAGCGGCGGCGGGAGGAGCAGCGCCCGCGAG 13112 Query 18445 ACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||| || |||||| ||||||||||| ||||||||||| Sbjct 13111 ACCATCGCGCGCGTAGCCGCCGGCGCCGTCGCCGAGAA 13074 Score = 86.0 bits (94), Expect = 8e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 19048 ACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGC 19107 |||||| ||||||||| || || ||||| | |||||||| | ||||||||||||| Sbjct 12837 ACAGCACCGGCGGCACCGTCACCTGCGTCATCAGGAACGTGCCCTCGGGCCTCGGCGAGC 12778 Query 19108 CGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCA 19167 | ||| |||||| ||||||| | | | ||||||||| || ||||| ||| || Sbjct 12777 CCGCCTTCGACAAGCTCGAGGCAAAGATTGGTCACGCCATGATGAGCATCCCCGCCGTCA 12718 Query 19168 AGGGATTCGAGATTGGCAGCGGGTT 19192 ||| ||||| || ||| ||| || Sbjct 12717 AGGCCTTCGAAATCGGCTCCGGCTT 12693 >seq1108 Length=134796 Score = 138 bits (152), Expect = 1e-26 Identities = 192/269 (71%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027 |||||||| || ||||||||||| ||||| | || | || |||||||| || Sbjct 108562 GAGGCCGTACTAGAACTCAACGCCAGTGACGAAAGGGGTATTGATGTCGTGCGAAACCGA 108503 Query 1574028 ATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATC 1574087 |||||| | |||| |||| || ||| || ||||| || || ||| | ||||| Sbjct 108502 ATCAAGGGCTTCGCCCAAAAGAAAGTCACCCTACCCCCCGGCCGACATAAGCTCGTCATC 108443 Query 1574088 CTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAA 1574147 |||||||| |||||| || | || |||| || || || ||||| || || |||||| Sbjct 108442 CTCGACGAAGCCGACAGCATGACCTCGGGCGCGCAACAAGCCCTCCGCCGAACGATGGAA 108383 Query 1574148 AAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAG 1574207 | || ||||||| ||||| || ||| | ||||||||| ||| | | |||||||| Sbjct 108382 ATCTACTCCAACACCACGCGATTCGCCTTCGCGTGCAACCAGTCCAACAAGATCATCGAG 108323 Query 1574208 GCCCTCCAAAGTCGCTGCGCCATTCTGCG 1574236 ||||||| |||||||||||||| || Sbjct 108322 CCCCTCCAGTCCCGCTGCGCCATTCTCCG 108294 >seq954 Length=26895 Score = 122 bits (134), Expect = 1e-21 Identities = 263/391 (67%), Gaps = 17/391 (4%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| ||| ||||| || ||||| || | | ||||||||| Sbjct 24677 CTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATCGGAATAATGCCGTTGGA 24736 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||| || ||||| | || | ||| | ||| || | || | | ||| Sbjct 24737 TGTTCCGTTTGTCCCCGCAATATATGAGCCCGTGGCACGAATGCGATGAATGTTGAGGCC 24796 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCT 1630243 ||||||||||||| || || || | ||||| ||| || || ||||| || || |||| Sbjct 24797 GATGCCGCCGGCCATTTTTGAAATCATTGCGCA-TGTCTTCAGGGTGTCATAAATTCCCT 24855 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 |||| || |||||||||| ||||| |||||||| || || | || | |||| Sbjct 24856 CGATACTATCATCCTTCATGTCTACGAGGAAGCACGAAGACAGCTGGGCTTGGGGTGTGC 24915 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363 ||||||| ||||| ||||| | || ||||| || | ||||||| | ||| | Sbjct 24916 CGGCGTTAAAGAGAGTGGGTGAAGCGTGTGTGAAAAATTTGGACGACATGAGATTGTACG 24975 Query 1630364 TGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGA 1630423 | | | ||| ||| | | ||||| || ||| ||| |||| ||||| Sbjct 24976 TTTCAATCACACGCTCAACGTCATCGCCC-------CAA----ATA----CCGACGGCGA 25020 Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTCGAC 1630454 | ||||| | ||||| ||| || |||||||| Sbjct 25021 CACGCATAATCATGTGCTGAGGTCGCTCGAC 25051 Score = 91.5 bits (100), Expect = 2e-12 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1627870 TCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGGCC 1627929 || || | |||||||||||| || || || ||||||||||||| || || ||||||| Sbjct 24009 TCCGCTAAGCCCTGCACGCCTACACCAATGGGCCGGTGGCGCATATTGCTGTTGCGGGCC 24068 Query 1627930 TCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCT 1627987 || |||||||||||| ||||| ||||| | |||||||| | |||||||||| Sbjct 24069 TCTTGCACCGGGTAGTAGTTGACATCGATGATCTTATTGAGGTTTCGAACCACGACCT 24126 >seq808 Length=275957 Score = 116 bits (128), Expect = 5e-20 Identities = 171/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||| ||||| Sbjct 154853 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATG 154912 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | | ||||| ||| || ||||| | | Sbjct 154913 TTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGTAGATCTTCTCATTGCCGAGAGCGACA 154972 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || | ||||||||| ||||| |||||||| ||||||| ||||||||||||| Sbjct 154973 AGTAGCCTGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTCGCGTTCATGCCGAGC 155032 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | ||| | | ||||| | |||||||| |||||| ||| ||| Sbjct 155033 AGGGCGCAAGGGAGAGCCTCAGTGAGGAACTCCTGCTCGATCTTGACGGCATCGGTAATG 155092 Query 868931 AT 868932 || Sbjct 155093 AT 155094 Score = 95.1 bits (104), Expect = 1e-13 Identities = 173/251 (69%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | |||| | | ||| Sbjct 155529 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCAGGAATCTGG 155588 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || | | ||||||||| |||||||||||| |||||||| Sbjct 155589 ACCTCGGCGCTGAATCGCTCAACGAGGTTCTCGTTGACGATGCCGTCGGAAGCGGCGAAG 155648 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC--GACA-CCCAGTGG 869809 || || || | ||| ||| || | |||||| || ||||| | | |||||| | Sbjct 155649 AAGGCAAGAATGTGAGAGATGAAATACTTCTCGTCATCATTGAGCTTGTTACCCCAGTCG 155708 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | || | ||| || | |||||| || ||||||| ||||| |||||||| ||| Sbjct 155709 TGGAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAAAGAGGCTTCGGCCTTCTTG 155768 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 155769 TACATTTGCCA 155779 Score = 93.3 bits (102), Expect = 5e-13 Identities = 141/197 (72%), Gaps = 13/197 (7%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || ||| ||| | || ||| |||| ||| || ||||||||||| ||||| Sbjct 155167 ACCCTCATCACGAGAGATGAGCTCATTGGAGAAGGTGAGACCAGGCATGAGGCCACGCTT 155226 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGAAAAAGATGCCCTCGACGGCGGCA 869296 ||||||||| || |||| | | || || ||| ||| ||||| ||||||||||| || Sbjct 155227 CTTGAGCCAGAAAATGGAG--GCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCG 155284 Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTG---TCGAGGCCCTCCTTGTTGATCCACTTCATC 869353 ||| ||| ||| |||| || |||||| ||| || | | |||||| || Sbjct 155285 AAGGCGACGAGGCGCTGAGCGAAGGTGGCCTCGCGGTCAGC------GATCCATCGCAGA 155338 Query 869354 GCCCAGTCGGCCTTTTT 869370 |||||||||||||| || Sbjct 155339 GCCCAGTCGGCCTTCTT 155355 >seq903 Length=30827 Score = 107 bits (118), Expect = 2e-17 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| |||||||||| ||||||||||| || || || | || |||||| | || |||||| Sbjct 8384 GCCTCCAACTACCTTGACATCAAGCCCCTACTGGACGTCGGTTGCAAGACCGTCGCCAAC 8443 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 |||||||| || || || ||||| |||||||||||||| || ||||| Sbjct 8444 ATGATCAAAGGGAAATCCCCCGATGAGATCCGCAAGACTTTCAACAT 8490 >seq347 Length=84705 Score = 86.0 bits (94), Expect = 8e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 507735 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGG 507794 ||||||| ||||| ||||||||||||||||||||||||||||| |||||| | || || Sbjct 18117 CCTACAATGCCGATTTTGACGGCGACGAGATGAACCTGCACGTTCCCCAGACGGAAGAGG 18058 Query 507795 CGCGCGCCGA 507804 |||| ||||| Sbjct 18057 CGCGAGCCGA 18048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107009209542128