Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq871 82.4 6e-11 >seq871 Length=35157 Score = 82.4 bits (90), Expect = 6e-11 Identities = 194/293 (66%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | |||| || |||||| |||||| || || || Sbjct 17761 TCGGTCTCGGGGTTCTTGCACTTCTTGCACAGGACGAACTTGGAGATGAATCCGTCGAGA 17820 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 ||||||| | || || ||||||| ||||||| ||| |||| || | | Sbjct 17821 TGGTCCTGCAGTTTGCTGGCTTCGTGGGCTCCGTTGATGATCCATCGGTCATCGGGAGGA 17880 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 || | | || || || || |||||| | ||||||||||| | | ||| | || Sbjct 17881 TCAATGTTGGTCTGAGCACCAAGCTCGAAGCCGAAGTACTTGATGAGATAAGAACCAGGT 17940 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || |||| || ||||| | || |||||| || || ||||||||||| || || Sbjct 17941 CGGGAGAGCGACTGGGCGACGCTGCTCAGGTTGACAATAACGGTCTTGATGCCATTACCT 18000 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610 || ||||| | ||||| || || ||| |||||||| ||||| || || Sbjct 18001 TTGCCTTCAATCTTGGTCTGGAGTCGTTCCATCTTGTAGCGATAGAAAGCATC 18053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412833630092912