Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq808 145 1e-28 seq903 107 3e-17 seq954 102 1e-15 seq347 89.7 8e-12 seq1219 87.8 3e-11 >seq808 Length=275957 Score = 145 bits (160), Expect = 1e-28 Identities = 195/269 (72%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 793873 TCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAA 793932 |||||| || || | ||||||| ||||| || || || || ||| |||||| | Sbjct 154827 TCCTCTTAGTGCTGGCCATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGA 154886 Query 793933 AGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGT 793992 ||||||||||||| |||| ||||| |||||| | ||| ||||||| | | || Sbjct 154887 AGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGT 154946 Query 793993 AGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGC 794052 || |||||| ||||| | |||| || | |||||||||||| ||||||||||| Sbjct 154947 AGATCTTCTCATTGCCGAGAGCGACAAGTAGCCTGTCGGCGACGAACTCAATGTACTGCT 155006 Query 794053 ACATGAGGGCGGCGTTCATGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCT 794111 ||||||| ||||||||||||| || || || ||| || | ||| ||| ||||| Sbjct 155007 TCATGAGGTTCGCGTTCATGCCGAGCAGGGCGCAAGGG-AGAGCCTCAGTGAGGAACTCC 155065 Query 794112 TTCTCGATCTCGACGGCCTCGATGATGAT 794140 | |||||||| |||||| ||| | ||||| Sbjct 155066 TGCTCGATCTTGACGGCATCGGTAATGAT 155094 Score = 104 bits (114), Expect = 4e-16 Identities = 97/121 (80%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 794548 GTGTCGATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGAT 794606 || || |||||| |||||||| ||||| || | | || ||||||| |||||| || || Sbjct 155451 GTCTCAATGGCGTTGAAGAGGTGAGTCCT-CTGGGCGGGCTCCTTGATGTAGGTATCAAT 155509 Query 794607 GAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 |||||| ||||||||||| ||||||||||| || || ||||||||| || || ||||| Sbjct 155510 GAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCA 155569 Query 794667 G 794667 | Sbjct 155570 G 155570 >seq903 Length=30827 Score = 107 bits (118), Expect = 3e-17 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| |||||||||| |||||||||||||| || || | || ||||||||||| |||||| Sbjct 8384 GCCTCCAACTACCTTGACATCAAGCCCCTACTGGACGTCGGTTGCAAGACCGTCGCCAAC 8443 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 | ||||| || || || ||||| || ||||||||||| || ||||| Sbjct 8444 ATGATCAAAGGGAAATCCCCCGATGAGATCCGCAAGACTTTCAACAT 8490 >seq954 Length=26895 Score = 102 bits (112), Expect = 1e-15 Identities = 260/392 (66%), Gaps = 19/392 (5%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || | || |||| ||| ||||| || ||||| || | || ||||||||| Sbjct 24677 CTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATCGGAATAATGCCGTTGGA 24736 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||| || ||||| | || | ||||| ||| || | || | | ||| Sbjct 24737 TGTTCCGTTTGTCCCCGCAATATATGAGCCCGTGGCACGAATGCGATGAATGTTGAGGCC 24796 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||||||||||||| || || || | ||||| | ||||| || || || || ||||| Sbjct 24797 GATGCCGCCGGCCATTTTTGAAATCATTGCGCATGTCTTCAGGGTGTCATAAATTCCCTC 24856 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| || |||||||||| | || |||||||| || || | | | ||||| Sbjct 24857 GATACTATCATCCTTCATGTCTACGAGGAAGCACGAAGACAGCTGGGCTTGGGGTGTGCC 24916 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGG--GACATGGCCTCGTAG 2073837 ||| || ||||| ||||| | || |||| | |||| |||||| | ||| Sbjct 24917 GGCGTTAAAGAGAGTGGGTGAAGC--GTGTGTGAAAAATTTGGACGACATGAGATTGTAC 24974 Query 2073838 GTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCG 2073897 || | | ||| ||| | | |||| | | | ||| ||| |||| |||| Sbjct 24975 GTTTCAATCACACGCTCAA---CGTCATCG----CCCCAA----ATA----CCGACGGCG 25019 Query 2073898 ACGCGCATGATCATGTACTGGGGTCGCTCGAC 2073929 || ||||| ||||||| ||| ||||||||||| Sbjct 25020 ACACGCATAATCATGTGCTGAGGTCGCTCGAC 25051 Score = 91.5 bits (100), Expect = 2e-12 Identities = 128/178 (72%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCGGTTGAGGCGACGCGCGCCGGCGCTCTCC 2070111 || ||||||||||| ||||||||||| | |||||| | ||||| | | | || Sbjct 23922 GCGGCATGGTAGATTGTCTCAAAGATTTGGATGTTGAGCTGCCGCGCCTCAGGGGATTCG 23981 Query 2070112 CACGGCAGGTCCAT--CATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCG 2070169 | |||| | || || || || || || || | |||||||||||| || || || | Sbjct 23982 AAGGGCATGCGCAGGGCAAGG--AAGGCATCCGCTAAGCCCTGCACGCCTACACCAATGG 24039 Query 2070170 GCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227 |||||||||||| || || |||||||| |||||||||||| ||||| ||||| Sbjct 24040 GCCGGTGGCGCATATTGCTGTTGCGGGCCTCTTGCACCGGGTAGTAGTTGACATCGAT 24097 >seq347 Length=84705 Score = 89.7 bits (98), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 429664 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCGGAGATGG 429723 ||||||| ||||| ||||||||||||||||||||||||||||| |||||| |||| || Sbjct 18117 CCTACAATGCCGATTTTGACGGCGACGAGATGAACCTGCACGTTCCCCAGACGGAAGAGG 18058 Query 429724 CACGCGCCGAAG 429735 | || ||||||| Sbjct 18057 CGCGAGCCGAAG 18046 >seq1219 Length=122198 Score = 87.8 bits (96), Expect = 3e-11 Identities = 128/176 (73%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 653960 ACGGGCGAGCCCATGGAGGCGTTGATCTT-TTCGGCGCCGGTCTACTACCAGGCCCTGCG 654018 |||||||||||| | || || | ||||| |||| || ||||||||||| ||| Sbjct 79050 ACGGGCGAGCCCCTAGAAGCCTACATCTTCAACGGC-CCCATCTACTACCAGCGCCTCAA 79108 Query 654019 CCACGTGGCCATCGACAAGATCCACGCCCGGCCGCGCGG-CCCCGTGCAGATGCTCACCA 654077 ||| ||| | |||||||| ||| |||| | ||||| ||||| || || ||||| Sbjct 79109 GCACATGGTCCAAGACAAGATGCACTCCCGCGCCCGCGGACCCCGCGC-CATCCTCACGC 79167 Query 654078 AGCAGCCGGTCGAGGGCCGGTCGCGCTCGGGCGGCTTTCGCCTCGGAGAGATGGAG 654133 ||||| |||||| || |||||| |||||| | || ||||||||||||||| Sbjct 79168 GCCAGCCCACCGAGGGTCGTTCGCGCGACGGCGGCCTCCGTCTCGGAGAGATGGAG 79223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916077902695376