Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1408 136 3e-27 seq2 111 1e-19 seq910 100 2e-16 >seq1408 Length=106487 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 91060 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 91119 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || |||||||| | || | ||||||||||| Sbjct 91120 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 91179 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | |||| || || |||||| || | ||| ||||| Sbjct 91180 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTAATGGTT 91239 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| |||||||| || ||||| |||||| Sbjct 91240 TTACCCGTTAGGGTCTTGACGAAGATTTGCATG 91272 >seq2 Length=228398 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||||||||| || || || || ||| |||| |||| || || |||||||||||||| | Sbjct 5591 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 5532 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 | || || |||||||| | || | |||||||| || | || || || || Sbjct 5531 TAAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGT 5472 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || || |||||| |||| ||| |||||||| |||||||||||||| |||| Sbjct 5471 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAA 5412 Query 34968 A 34968 | Sbjct 5411 A 5411 >seq910 Length=30028 Score = 100 bits (110), Expect = 2e-16 Identities = 134/184 (73%), Gaps = 8/184 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || |||||||| ||| |||| |||| || || ||||| |||||||| Sbjct 19659 CTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 19600 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| |||||| ||||| | || | ||||||||||| | || || ||||| | Sbjct 19599 AATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTGAC--A 19542 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | | ||||| || | |||||| || | ||| |||||||| || || ||||||| Sbjct 19541 T--TGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTGCCGGTAAGGGTCT 19484 Query 34962 TTAC 34965 | || Sbjct 19483 TGAC 19480 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| ||||||||||||||| || || || ||| |||| |||| Sbjct 19907 AGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 19848 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| || ||||| || || | || | ||||||||||| Sbjct 19847 TCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCCTTGTCC 19788 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | || || || | ||| || ||| Sbjct 19787 TGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTC 19728 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || ||||| || ||||||||||| Sbjct 19727 TTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 19696 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| || ||||| || ||| |||| | || || || |||||||| ||||| Sbjct 19351 CTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAA 19292 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||||| | || | ||||||||||| | || || |||||| Sbjct 19291 AATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTT 19232 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGT 34953 | || | ||| || |||||| || | || |||||||| || || Sbjct 19231 GTCGATAGTATCAGAGGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 19184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686512500496