Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1408 136 3e-27
seq2 111 1e-19
seq910 100 2e-16
>seq1408
Length=106487
Score = 136 bits (150), Expect = 3e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||| ||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 91060 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 91119
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||||||||| || |||||||| | || | |||||||||||
Sbjct 91120 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 91179
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | |||| || || |||||| || | ||| |||||
Sbjct 91180 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTAATGGTT 91239
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| ||||| |||||||| || ||||| ||||||
Sbjct 91240 TTACCCGTTAGGGTCTTGACGAAGATTTGCATG 91272
>seq2
Length=228398
Score = 111 bits (122), Expect = 1e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||||||||| || || || || ||| |||| |||| || || |||||||||||||| |
Sbjct 5591 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 5532
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
| || || |||||||| | || | |||||||| || | || || || ||
Sbjct 5531 TAAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGT 5472
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| |||| || || |||||| |||| ||| |||||||| |||||||||||||| ||||
Sbjct 5471 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAA 5412
Query 34968 A 34968
|
Sbjct 5411 A 5411
>seq910
Length=30028
Score = 100 bits (110), Expect = 2e-16
Identities = 134/184 (73%), Gaps = 8/184 (4%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| || || |||||||| ||| |||| |||| || || ||||| ||||||||
Sbjct 19659 CTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 19600
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| |||||| ||||| | || | ||||||||||| | || || ||||| |
Sbjct 19599 AATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTGAC--A 19542
Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961
| | ||||| || | |||||| || | ||| |||||||| || || |||||||
Sbjct 19541 T--TGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTGCCGGTAAGGGTCT 19484
Query 34962 TTAC 34965
| ||
Sbjct 19483 TGAC 19480
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||| ||||||||||||||| || || || ||| |||| ||||
Sbjct 19907 AGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 19848
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||| || ||||| || || | || | |||||||||||
Sbjct 19847 TCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCCTTGTCC 19788
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | || || || | ||| || |||
Sbjct 19787 TGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTC 19728
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| || |||||||||||
Sbjct 19727 TTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 19696
Score = 91.5 bits (100), Expect = 1e-13
Identities = 121/168 (72%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||||||||| || ||||| || ||| |||| | || || || |||||||| |||||
Sbjct 19351 CTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAA 19292
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| || |||||||| | || | ||||||||||| | || || ||||||
Sbjct 19291 AATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTT 19232
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGT 34953
| || | ||| || |||||| || | || |||||||| || ||
Sbjct 19231 GTCGATAGTATCAGAGGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 19184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325686512500496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |