Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq910 102 6e-17 >seq910 Length=30028 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || ||||| || || |||||||| ||||| | || |||||| Sbjct 19911 ACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCC 19852 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | | ||| ||||| || ||||||||||| || Sbjct 19851 ATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCCTT 19792 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || || | || | ||||| || ||| ||||| || || || Sbjct 19791 GTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAAT 19732 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | || || || || |||||||| Sbjct 19731 CGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 19696 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || || || || || || || || || |||| | |||||| Sbjct 19683 ACGGAGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCC 19624 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || ||||| || | ||||||| ||| || || || ||||||||||| || Sbjct 19623 ATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTT 19564 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || |||||| | || | ||||| || || || || || || || Sbjct 19563 GTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAAT 19504 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATAT 29780 || ||||| || | ||| || || | ||| Sbjct 19503 GGTCTTGCCGGTAAGGGTCTTGACGACTAT 19474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385211763343344