Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq954 286 3e-72 seq1408 134 1e-26 seq910 102 8e-17 seq2 98.7 1e-15 >seq954 Length=26895 Score = 286 bits (316), Expect = 3e-72 Identities = 1130/1754 (64%), Gaps = 53/1754 (3%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTT 148109 ||||| ||| || ||||| || || ||||| |||||||| | ||| | |||| Sbjct 23418 GACTGCGACTGATCGATGAAGGCACCCCGGTCGGCGGCCATCTGGACAACGGTACGCTGG 23477 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 || |||||| |||||||||| || |||||||| |||||||| | ||| Sbjct 23478 GAG---ATTTCCCAGACCGTCTTGTAGAGGGCCTTGATATCCTCGGGAATACTAGGAATG 23534 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | ||||||| | ||||| || |||| ||| ||||| | ||| Sbjct 23535 TTCTGAATGGAGCCGCCTTCCGCAATGATGCGATTCTTCATGGAGTCCGACCAAAGGCCA 23594 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 || || | ||||| || || | |||| || ||||| || |||||||| | ||| Sbjct 23595 AGGTCAACAAGGTCCCGGAGAAGCCAAGGATTGACGACCTGGAATTCGCCGGCCAAGACG 23654 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || | || | ||| || | |||||||| | |||||||| || | ||| || Sbjct 23655 CGTCGTTGGTAAATGTTCGAGGTGTATGGTTCAAAGCATTCGTTGTTCCCGAGAATTTGA 23714 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | || |||| ||||||||| |||| || || ||| || | || | | || Sbjct 23715 GATGTACTTGCAGTGGGCATGGGGGCTAACAAGAGGCTGTTACGGACGCCATGCTGCTTG 23774 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || | ||||||||| |||||| ||| || ||| || | || |||||||||||| Sbjct 23775 ATCTGCTCCTTCAGAGCATCCCAGTTCCACAGGTCCGAGGGCTTAACATTCCACATGTCG 23834 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 |||| ||||| || | | || ||||||||| | ||| || || ||| || Sbjct 23835 AACTGGAGAATTCCTTGAGAGACAGGAGAGCCCTCGTATGTCGAGTAAGGGCCCTGCTCC 23894 Query 148530 GCCGCCAGTTCGCAGCT--CGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587 | || || | | ||| || || ||| | | ||| || ||||| ||||| Sbjct 23895 TTGG--AGATCTCCATTGACGCTTCCAGAGCGGCATGGTAGATTGTCTCAAAGATTTGGA 23952 Query 148588 TGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647 |||||||| || |||| | |||| | ||||| ||||| | || || || | Sbjct 23953 TGTTGAGCTGCCGCGCCTCAGGGGATTCGAAGGGCATGCGCAGGGCAAGGAAGGCATCCG 24012 Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707 | | |||||| ||||| || |||||||||||||| || ||| | ||| || |||| Sbjct 24013 CTAAGCCCTGCACGCCTACACCAATGGGCCGGTGGCGCATATTGCTGTTGCGGGC-CTCT 24071 Query 148708 CG-AGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTA 148766 | | ||| |||| |||| ||||||||||| | || || || ||||| ||||| || Sbjct 24072 TGCACCGGGTAGTAGTTGACATCGATGATCTTATTGAGGTTTCGAACCACGACCTTGGTC 24131 Query 148767 ATTCTGCGCAGCAATTCAAAATCGTAC------TTGTCATCTACGATGCATCGGTTCACG 148820 | | | | || || || |||||| |||| | ||| | | | || | Sbjct 24132 ACTTCGTGGAGTTTCTCGAAGTCGTACTCGCCTTTGTTGTAGTCGACGAACGAGGGCAAG 24191 Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 || | || || | ||||| || ||| ||||||||| || ||||| ||||||||| Sbjct 24192 GCAAGCGATGCCAAGTTGCAGACCGCCACCTCATCCGGAGCCGAATACTCGACGATCTCG 24251 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | || |||||| || ||| ||| | ||||||||| |||||||||| |||||| Sbjct 24252 GTACAGAGATTGGAGCTGCGGATAGTGCCTAGGTTCTTTTGGTTGCTCTTGCGGTTGCAG 24311 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAAC 148997 |||||| || |||||| | || ||||||||| ||| | |||| || | || Sbjct 24312 TGGTCCTTATAAAGCATGAAAGGATTTCCAGTTTCCGTCTGTGCCTCCAAGATGGCGTAC 24371 Query 148998 CGATGCAGGTCCTGCGCGCGCA----CTTGCTGCTCGTAGCGACCCTCCTGCTCGTA--T 149051 | ||| | || || | ||||| | ||| || |||| ||||| | Sbjct 24372 C---ACAGCTTTTGAGCCTTTAGAGTCTTGCGAC----CGCGGCCTTCCTTTTCGTACTT 24424 Query 149052 AAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGC 149111 ||| | || ||||||| |||| || || |||||| | || || ||||| | || Sbjct 24425 TTCGTACAAGGC--CTCGAACTCCTCACCATAACAATCGGCAAGGCCAGGGCATTCGTTA 24482 Query 149112 GGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACC 149171 |||||||| | | ||| | |||| | | || || ||||| || |||||||| | | Sbjct 24483 GGGCACATCAAGGTCCAGTCTCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATC 24542 Query 149172 CAGAGCGCGTACATGAGGTCGCGCGCCTTGCA-GTCTTCGGCGCCCATGTTGCGGCGCAG 149230 ||||| ||| | || || || | || | | ||||| ||| || ||| || Sbjct 24543 CAGAGTGCGAGGAAAAGATCCCG-GGCTCGAACCTCTTCCTTGCCGTGATTCTTGCGAAG 24601 Query 149231 GT-TGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCT 149289 | || || | ||||| || |||||||| ||||||| ||| | || | || || Sbjct 24602 ATCCAAGAACTC-GAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCGG 24660 Query 149290 TGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAG 149346 |||| || || |||||||| |||| | | ||||||| || || |||| ||| | Sbjct 24661 GGCGCTTATTACCACCCTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATCG 24720 Query 149347 GTTCAATGCCACTGGCAGTGCCGTTAGT-AGAGCTA-ATGCGACTGCCGCGCGCTCGCAC 149404 | |||||| ||| || ||||| || || | || || ||| || || | Sbjct 24721 GAATAATGCCGTTGGATGTTCCGTTTGTCCCCGCAATATATGA--GCCCGTGGCACGAAT 24778 Query 149405 TTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGA 149463 || | ||||| ||||||||||||| | ||||| || ||||| ||| | | Sbjct 24779 GCGATGAATGTTGAGGCCGATGCCGCCGGCCATTTTTGAAATCATTGCGCATGTCTTC-A 24837 Query 149464 GCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACA 149523 | || || || |||||||| || || ||||||| | || |||||||| ||| Sbjct 24838 GGGTGTCATAAATTCCCTCGATACTATCATCCTTCATGTCTACGAGGAAGCACGAAGACA 24897 Query 149524 TTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCT 149583 || | | |||||||| || | ||||| |||||||| ||| |||| Sbjct 24898 GCTGGGCTTGGGGTGTGCCGGCGTTAAAGAGAGTGGGTGAAGCGTGTGTGAAAAATTTGG 24957 Query 149584 GGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGG 149643 ||| | | ||||| || | ||| || || | ||||||||| || || | || Sbjct 24958 ACGACATGAGATTGTACGTTTCAATCACACGCTCAACGTCATCGCCCCAAATACCGACGG 25017 Query 149644 CGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGT 149703 |||| ||||| | ||| ||||| |||||||| | | || ||| ||| || | || Sbjct 25018 CGACACGCATAATCATGTGCTGAGGTCGCTCGACAATCTTCCCGTCAAGTTTCAGGAGGT 25077 Query 149704 AGCCGTT--TTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTC 149761 | || | ||| ||||||||| |||| ||||| | ||| | || || | | ||| | | Sbjct 25078 A--CGATCGTTCGAGTGTCTTGAAGCCGAAGTATTGGTAATTGAAATCCCTGTCGTAGAC 25135 Query 149762 AATGGCGGCGTCGA 149775 |||||| | |||| Sbjct 25136 AATGGCTGAATCGA 25149 >seq1408 Length=106487 Score = 134 bits (148), Expect = 1e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| ||| | ||| |||||||||||||||||| Sbjct 91074 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 91133 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| |||||||| |||||| ||| Sbjct 91134 GGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 91193 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| ||| | |||||| || || || || Sbjct 91194 GACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTAATGGTTTTACCCGTTAGGGT 91253 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| || |||||| Sbjct 91254 CTTGACGAAGATTTGCATG 91272 >seq910 Length=30028 Score = 102 bits (112), Expect = 8e-17 Identities = 137/188 (73%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||| || | ||| | | | ||||||||||||||||| Sbjct 19664 GTAGACTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 19606 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | || || ||||| ||||| || || |||||||| |||||| ||| Sbjct 19605 GGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTT 19546 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | ||| || |||| ||| | ||| |||||||| || || Sbjct 19545 GACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTGCCGGTAAGGGT 19486 Query 133643 TTTTACGA 133650 || |||| Sbjct 19485 CTTGACGA 19478 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || |||||||| | ||| ||| | ||||| ||||||||||| Sbjct 20120 GTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCA-TCCTCAAGCTGCTTGCC 20062 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| |||||||| ||||| || || ||||||||||| ||||| ||| Sbjct 20061 AGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCTTCCTTGTCCTGAATCTTCGACTT 20002 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | | || || |||| || | || ||||| || || || Sbjct 20001 CACATTGTCGATGGTATCCGAAGATTCAACCTCGAGCGTAATAGTCTTGCCAGTAAGGGT 19942 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 19941 CTTGACAAAGATCTGCAT 19924 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| |||||||| || | ||| |||||| |||||||| || Sbjct 19356 GTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCA 19297 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || |||||||||||||| |||||||| |||||||| ||||| |||| Sbjct 19296 GCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 19237 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | | || | || || | || ||| || || | |||| ||| |||||||| Sbjct 19236 ACGTTGTCGATAGTATCAGAGGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 19184 >seq2 Length=228398 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| ||||||||||| | ||| | | | |||||||||||||| || ||| |||| Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTTCCGGCGAAAAT 5531 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || |||||||||||||| ||||| || ||||| || ||||| ||| | | || Sbjct 5530 AAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTC 5471 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | || ||| || || | ||||| ||| ||||| || || || || || || Sbjct 5470 GATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAA 5411 Query 133652 A 133652 | Sbjct 5410 A 5410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483411228268160