Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq954 122 2e-22 >seq954 Length=26895 Score = 122 bits (134), Expect = 2e-22 Identities = 436/676 (64%), Gaps = 13/676 (2%) Strand=Plus/Minus Query 110469 CATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTT 110528 || ||| | || || || |||||||| || || || || || |||| ||||| Sbjct 24943 CACGCTTCACCCACTCTCTTTAACGCCGGCACACCCCAAGCCCAGCTGTCTTCGTGCTTC 24884 Query 110529 CTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCT 110588 || ||| || || |||||| ||| || || |||||||| | || || || | ||| Sbjct 24883 CTCGTAGACATGAAGGATGATAGTATCGAGGGAATTTATGACACCCTGAA-GACA-TGCG 24826 Query 110589 C--TTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAG 110646 | | ||||| |||| | || || || || | || ||||| ||||| | | | Sbjct 24825 CAATGATTTCAAAAATGGCCGGCGGCATCGGCCTCAACATTCATCGCATTCGTGCCACGG 24766 Query 110647 GAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCT 110706 | || |||| || | || || | || | || || |||| ||| | | |||| Sbjct 24765 GCTCATATATTGCGGGGACAAACGGAACATCCAACGGCATTATTCCGATGCTTCGTGTCT 24706 Query 110707 TCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTA 110763 ||||| |||| || | || || | || |||||||| | | || | ||||| | Sbjct 24705 TCAACAACACCGCCAGGTACGTTGACCAGGGTGGTAATAAGCGCCCCGGAGCCTTTGCCA 24646 Query 110764 TCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAG 110823 |||| || || || ||||| ||||| |||| || ||||| || ||||| || ||||| | Sbjct 24645 TCTACCTTGAGCCATGGCACGCAGATGTATTCGAGTTCTTGGATCTTCGCAAGAATCACG 24586 Query 110824 GATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCA 110883 | ||||| |||| || ||| | || ||| | ||||| | ||| | |||| Sbjct 24585 GCAAGGAAGAGGTTCGAGCCCGGGATCTTTTCCTCGCACTCTGGATCCCCGATCTTTTCA 24526 Query 110884 TGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTC 110943 ||||||| ||| || | || || ||| | | ||||| ||| | | ||||| | Sbjct 24525 TGAAACGAGTTGAAAAGAACGGAGACTGGACCTTGATGTGCCCTAACGAATGCCCTGGCC 24466 Query 110944 TATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCA 111003 | | ||| ||||| | ||||| || | | | |||||||| || ||||| |||||| Sbjct 24465 TTGCCGATTGTTATGGTGAGGAGTTCGAGGCCTTGTACGAAAAGTACGAAAAGGAAGGCC 24406 Query 111004 AGTTTCGCAAACAAATTCCA---GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAG 111060 ||||| | | || | |||||| | || |||| | ||| | || |||| Sbjct 24405 GCGGTCGCA---AGACTCTAAAGGCTCAAAAGCTGTGGTACGCCATCTTGGAGGCACAGA 24349 Query 111061 TTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAA 111120 |||||||||| ||||| || | ||||| || || || ||||| || |||| Sbjct 24348 CGGAAACTGGAAATCCTTTCATGCTTTATAAGGACCACTGCAACCGCAAGAGCAACCAAA 24289 Query 111121 TGAATTTAGGAACAAT 111136 ||| |||| || || Sbjct 24288 AGAACCTAGGCACTAT 24273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186788713634224