Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq808 149 9e-30
seq954 125 1e-22
seq1108 109 8e-18
>seq808
Length=275957
Score = 149 bits (164), Expect = 9e-30
Identities = 242/340 (71%), Gaps = 15/340 (4%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||| ||||| || ||||| || |||||| | || |
Sbjct 155783 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCTTTCTGGACTGCTGAGGAGATTGATC 155725
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGG-TGTC--GCTGAGCGACGACGAGCGCCATTTC 1455887
|| | || |||| |||||| | | ||| | || |||||| |||||
Sbjct 155724 TCTCCAAGGATCTCCACG----ACTGGGGTAACAAGCTCAATGATGACGAGAAGTATTTC 155669
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| ||| | || ||||| || |||||| ||| |||||||| ||||||||| |
Sbjct 155668 ATCTCTCACATTCTTGCCTTCTT-CGCCGCTTCCGACGGCATCGTCAACGAGAACCTCGT 155610
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
| || || | |||||||| | || ||||| || | || ||||| ||||||||
Sbjct 155609 TGAGCGATTCAGCGCCGAGGTCCAGATTCCTGAGGCCCGCTGCTTCTACGGTTTCCAGAT 155550
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||| || |||||||| ||||| || || |||||| |||||||
Sbjct 155549 CATGATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATTGATACCTACATCAAGGA 155490
Query 1456068 CCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACAC 1456106
|| | | || ||||| |||||||| |||||| || ||
Sbjct 155489 GCCCGCCCAG-AGGACTCACCTCTTCAACGCCATTGAGAC 155451
Score = 132 bits (146), Expect = 7e-25
Identities = 192/266 (72%), Gaps = 4/266 (2%)
Strand=Plus/Minus
Query 1456516 CAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575
|||| | ||||| ||| |||||| |||||||| | ||||| ||| ||| | || ||
Sbjct 155101 CAAGGACATCATTACCGATGCCGTCAAGATCGAGCAGGAGTTCCTCACTGAGGCTCTCCC 155042
Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635
|| || ||||||||||||| | | |||||| ||||||||||| || ||||||
Sbjct 155041 TTGCGCCCTGCTCGGCATGAACGCGAAC-CTCATGAAGCAGTACATTGAGTTC-GTCGCC 154984
Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695
||| | || || | || |||||| | ||||| |||| || | ||||||| |||
Sbjct 154983 GACAGGCTACTTGTCGCTCTCGGCAATG-AGAAGATCTACAGGTCCACCAACCCCTTCGA 154925
Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754
| |||||| ||||| |||| |||||||||||||| |||||| || | ||| ||
Sbjct 154924 CTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 154865
Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCA 1456780
||| ||||||||||||| ||||
Sbjct 154864 CTACCAGAAGGCCGGCGTCATGGCCA 154839
>seq954
Length=26895
Score = 125 bits (138), Expect = 1e-22
Identities = 185/260 (71%), Gaps = 4/260 (2%)
Strand=Plus/Minus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
||||| |||||||| |||||||| || | | ||| || |||||||| || | |||
Sbjct 24934 CCCACTCTCTTTAACGCCGGCACACCCCAAGCCCAGCTGTCTTCGTGCTTCCTCGTAGAC 24875
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| |||||||| || |||||||| || ||| ||||| | || ||
Sbjct 24874 ATGAAGGATGATAGTATCGAGGGAATTTATGACACCCTGAAGACATGCGCAATGATTTCA 24815
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGG--TGCGCGCCGCGGGCGCCTACG 260102
|| ||||||||||||||| | | || || | | || ||| ||||| | ||
Sbjct 24814 AAAATGGCCGGCGGCATCGGCCT--CAACATTCATCGCATTCGTGCCACGGGCTCATATA 24757
Query 260103 TGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACA 260162
| ||||| || ||||| ||||||||| || | || |||||||| || || ||| |||
Sbjct 24756 TTGCGGGGACAAACGGAACATCCAACGGCATTATTCCGATGCTTCGTGTCTTCAACAACA 24697
Query 260163 CGGCGCGCTACGTCGACCAG 260182
| || | ||||| ||||||
Sbjct 24696 CCGCCAGGTACGTTGACCAG 24677
>seq1108
Length=134796
Score = 109 bits (120), Expect = 8e-18
Identities = 200/293 (68%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911
|||||||| || | ||| | || || ||||| || ||| ||| |||| |||||||
Sbjct 108270 TGGGCGTCCGTTAACCGCGAGTACCGGAGAATGGCGCAGCGGGACTGGAGGGGCTCGATG 108329
Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971
| | | ||| |||||| || | ||| || ||||| || |||| | |||||||
Sbjct 108330 ATCTTGTTGGACTGGTTGCACGCGAAGGCGAATCGCGTGGTGTTGGAGTAGATTTCCATC 108389
Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031
|| |||||||| ||||| || ||| || | || |||||| ||||||||||||| |
Sbjct 108390 GTTCGGCGGAGGGCTTGTTGCGCGCCCGAGGTCATGCTGTCGGCTTCGTCGAGGATGACG 108449
Query 333032 ATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTG 333091
| ||| || || ||| | || || || | || |||| | ||||| ||
Sbjct 108450 AGCTTATGTCGGCCGGGGGGTAGGGTGACTTTCTTTTGGGCGAAGCCCTTGATTCGGTTT 108509
Query 333092 CGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTC 333144
|||||||| || | || | ||||| ||||||||||| || ||||||||
Sbjct 108510 CGCACGACATCAATACCCCTTTCGTCACTGGCGTTGAGTTCTAGTACGGCCTC 108562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177658420288608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |