Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq954 221 2e-52 >seq954 Length=26895 Score = 221 bits (244), Expect = 2e-52 Identities = 637/971 (66%), Gaps = 18/971 (2%) Strand=Plus/Plus Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336 ||||| | || || || || ||||||| | | | ||| | | ||||| ||||| Sbjct 24198 GATGCCAAGTTGCAGACCGCCACCTCATCCGGAGCCGAATACTCGACGATCTCGGTACAG 24257 Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396 ||||| | |||||| || || || | || || ||||| ||| ||| |||| Sbjct 24258 AGATTGGAGCTGCGGATAGTGCCTAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCC 24317 Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACG 69456 || ||||| || || ||| | |||||||| |||| | || | || | | ||| | Sbjct 24318 TTATAAAGCATGAAAGGATTTCCAGTTTCCGTCTGTGCCTCCAAGATGGCGTACCACAGC 24377 Query 69457 ACCCTAGCATTTATTACGGTCTTGTAAC-GCTTC--TCTTTTTCATATTGT--GTATATA 69511 ||| |||| |||||| || || | || ||||| || | | ||| | Sbjct 24378 TTTTGAGCCTTTAGA---GTCTTGCGACCGCGGCCTTCCTTTTCGTACTTTTCGTACAAG 24434 Query 69512 GCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCA 69571 ||| ||||| || || || || ||| | | ||||| ||||| || || ||||||| Sbjct 24435 GCC--TCGAACTCCTCACCATAACAATCGGCAAGGCCAGGGCATTCGTTAGGGCACATCA 24492 Query 69572 ATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTA 69631 | | ||| | | | | | |||||||||||| || |||||||| ||||| || || | Sbjct 24493 AGGTCCAGTCTCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGCGA 24552 Query 69632 TAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACT 69691 || ||||| | || || | ||||| || || ||| || |||||| | |||| Sbjct 24553 GGAAAAGATCCCGGGCTCGAACCTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAACT 24612 Query 69692 CCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTC 69751 | | | ||| | |||||||| || || || || || | | |||| || || ||||| | Sbjct 24613 CGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCGGGGCGCTTATTAC 24672 Query 69752 CTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCAT 69811 | ||||| || | ||| ||||| ||||| || |||| | |||||||||||||| || | Sbjct 24673 CACCCTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATCGGAATAATGCCGT 24732 Query 69812 TAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATA 69871 | ||| | || ||||| || | |||||| || | || ||||| | ||| | Sbjct 24733 TGGATGTTCCGTTTGTCCCCGCAATATATGAGCCCGTGGCACGAATGCGATGAATGTTGA 24792 Query 69872 GACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATAC 69931 | || || || || |||||||| || || | || || |||| |||||||| || | Sbjct 24793 GGCCGATGCCGCCGGCCATTTTTGAAATCATTGCGCATGTCTTCAGGGTGTCATAAATTC 24852 Query 69932 CCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAG 69991 |||| || |||||||| |||||| | || || || ||||| || || | Sbjct 24853 CCTCGATACTATCATCCTTCATGTCTACGAGGAAGCACGAAGACAGCTGGGCTTGGGGTG 24912 Query 69992 TTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGT 70051 | || || ||||| | || || || ||||| ||||| |||| || | ||||||| Sbjct 24913 TGCCGGCGTTAAAGAGAGTGGGTGAAGCGTGTGTGAAAAATTTGGACGACATGAGATTGT 24972 Query 70052 ATGTTTCAATAGCTGATTCTATATC--CCACTGATGAATTCCTATCGCGACACGCATCAA 70109 | |||||||| | || | || | | | ||| || | ||||||||||| | Sbjct 24973 ACGTTTCAATCACACGCTCAACGTCATCGCCCCA--AATACCGACGGCGACACGCATAAT 25030 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 ||| ||||||||||| || || | || | | ||||| ||||| ||| ||| || Sbjct 25031 CATGTGCTGAGGTCGCTCGACAATCTTCCCGTCAAGTTTCAGGAGGTACGATCGTTCGAG 25090 Query 70170 AGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTT 70227 || || || || || || | ||| ||||| || || ||||| | ||| | |||| Sbjct 25091 TGTCTTGAAGCCGAAGTATTGGTAATTGAAA--TCCCTGTCGTAGACAATGGCTGAATCG 25148 Query 70228 AGTTTATCCTT 70238 || | ||||| Sbjct 25149 AGCTCCTCCTT 25159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686895199205760