Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq954 143 3e-29 seq1386 96.9 4e-15 seq808 89.7 6e-13 >seq954 Length=26895 Score = 143 bits (158), Expect = 3e-29 Identities = 888/1402 (63%), Gaps = 45/1402 (3%) Strand=Plus/Plus Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765 |||| ||||| | |||||||||||||||||||| || || || | ||||| | || Sbjct 23662 GGTAAATGTTCGAGGTGTATGGTTCAAAGCATTCGTTGTTCCCGAGAATTTGAGATGTAC 23721 Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825 || || ||||| || || | ||| || |||||||| | || | || |||||| | | Sbjct 23722 TTGCAGTGGGCATGGGGGCTAACAAGAGGCTGTTACGGACGCCATGCTGCTTGATCTGCT 23781 Query 110826 CCTTGAGAACATCCCAGT--CGTAGTT--GAGCTTGGTTTCACCTTCCCACATGTCAAAC 110881 |||| ||| ||||||||| | || | ||| || || || || ||||||||| ||| Sbjct 23782 CCTTCAGAGCATCCCAGTTCCACAGGTCCGAG---GGCTTAACATT-CCACATGTCGAAC 23837 Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941 || || | ||||| || | ||||| ||||| | || || | || || | | Sbjct 23838 TGGAGAATTCCTTGAGAGACAGGAGAGCCCTCGTATGTCGAGTAAGGGCCCTGCTCCTTG 23897 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 | | || ||| ||||| | || || || || || |||||||| | || Sbjct 23898 GAGATCTCCATTGACGCTTCCAGAGCGGCATGGTAGATTGTCTCAAAGATTTGGATGTTG 23957 Query 111002 ATCTCCTTGGCTTCATCTGAATCAA-----ATGCGTAGCGGCACAAAATAAATACATCCG 111056 | || | || ||| || || | ||||| || ||| || || |||||| Sbjct 23958 AGCTGCCGCGCCTCAGGGGATTCGAAGGGCATGCGCAG-GGC----AAGGAAGGCATCCG 24012 Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116 | | || || || || | |||||| || | ||| |||||||| || || || ||| Sbjct 24013 CTAAGCCCTGCACGCCTACACCAATGGGCCGGTGGCGCATATTGCTGTTGCGGGC-CTCT 24071 Query 111117 --CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTA--ACAATCTTT 111172 || |||| || | || || |||| || | | || ||| | | || | ||| Sbjct 24072 TGCACCGGG-TAGTAGTTGACATCGATGA-TC-TTATTGAGGTTTCGAACCACGACCTTG 24128 Query 111173 GTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGA 111232 || | ||| || ||||| || | || | || | | | | ||| || || Sbjct 24129 GTCACTTCGTGGAGTTTCTCGAAGTCGTACTCGCCTTTGTTGTAGTCGACGAACGAGGGC 24188 Query 111233 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 111292 | ||| | |||||||| ||||| || ||| ||||||| | | | ||||| | || Sbjct 24189 AAGGCAAGCGATGCCAAGTTGCAGACCGCCACCTCATCCGGAGCCGAATACTCGACGATC 24248 Query 111293 TCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTG 111352 || ||||| | ||||| || || || || | ||||||||||| ||||| |||| Sbjct 24249 TCGGTACAGAGATTGGAGCTGCGGATAGTGCCTAGGTTCTTTTGGTTGCTCTTGCGGTTG 24308 Query 111353 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCC 111412 || ||||| || |||||| | || | || || |||||||||| | | || || Sbjct 24309 CAGTGGTCCTTATAAAGCATGAAAGGATTTCCAGTTTCCGTCTGTGCCTCCAAGATGGCG 24368 Query 111413 TTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGT 111471 | ||| | | | | | || || | | | | || || ||| ||||||||| Sbjct 24369 TACCACAGCTTTTGAGCCT-TTAGAGTCTTGCGACCGCGGCCTTCCTTTTCGTACTTTTC 24427 Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGAC 111530 ||| | ||| || ||||||||||| |||| || || || || || || || | Sbjct 24428 GTACAAGGCCTCGAACTCCTCACCATAACAATCGGCAAGGCCAGG-GCATTCGTTAGGGC 24486 Query 111531 AGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 111590 | | | | ||| | || | ||||| || ||||||||||| || || ||||| | Sbjct 24487 ACATCAAGGTCCAGTCTCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGA 24546 Query 111591 --GGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 | || |||| ||||| | ||| ||||||| | || || || || | || Sbjct 24547 GTGCGAGGAAA--AGATCCCGGGCTCGAACCTCTTCCTTGCCGTGATTCTTGCGAAGATC 24604 Query 111649 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 111708 | |||||| | | ||| ||||||||||||||||| |||| || | | ||| || Sbjct 24605 CAAGAACTCGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCGGGGCG 24664 Query 111709 ---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765 | ||| | || | || || | || ||| ||| || || |||||||| ||||| Sbjct 24665 CTTATTACCACCCTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATCGGAAT 24724 Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825 ||| || | ||| || ||||||||| |||| || |||| | | ||| Sbjct 24725 AATGCCGTTGGATGTTCCGTTTGTCCCCGCAATATATGAGCCCGTGGCACGAATGCGATG 24784 Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTT 111883 |||| | || || || || ||| ||||| || ||||| || | | || || Sbjct 24785 AATGTTGAGGCCGATGCCGCCGGCCATTTTTGAAATCATTGCG--CATGTCTTCAGGGTG 24842 Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943 |||| || || | ||| || ||||| || | | |||||||| |||| ||| Sbjct 24843 TCATAAATTCCCTCGATACTATCATCCTTCATGTCTACGAGGAAGCACGAAGACAGCTGG 24902 Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--G 112001 | | ||||| || || || ||||| || |||| ||||| ||| | | |||| | Sbjct 24903 GCTTGGGGTGTGCCGGCGTTAAAGAGAGTGGGTGAAGCGTGTGTGA--AAAATTTGGACG 24960 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 |||| | ||| || || | ||| |||| ||| || || || |||| |||| Sbjct 24961 ACATGAGATTGTACGTTTCAATCACACGCTCAACGTCATCGCCCCAAATACCGACGGCGA 25020 Query 112062 CCCGCATGAACATGTACTGTGG 112083 | ||||| | ||||| ||| || Sbjct 25021 CACGCATAATCATGTGCTGAGG 25042 >seq1386 Length=108819 Score = 96.9 bits (106), Expect = 4e-15 Identities = 137/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 164657 TGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCA 164716 ||| || ||||| |||||| | ||||| ||| | || || || |||||||||| || Sbjct 38630 TGGAGCAGGTGTCATTGATGCAGACTACCGTGGTCAGGTAAAGGTACTTCTCTTCAACCA 38689 Query 164717 CGGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCG 164776 ||| || | ||||| |||| ||| |||| ||||||||||| ||||| || ||||||| Sbjct 38690 CGGGGAGGAGGACTTCCAGGTGAAGGAAGGCGATCGCATCGCCCAACTCGTTATTGAGCG 38749 Query 164777 C-TGTGAAACACCCGATGTGGAGGAAATTGGTGTTCTTGAAGAGACGGAGAGAGGTGCGG 164835 | | || ||| ||||| || | |||| | | || || |||| | || ||||| | Sbjct 38750 CATCTGGAAC-CCCGAAGTTGTGGAAGTCCAGGAACTCGAGGAGAGCGTCAGGGGTGCCG 38808 Query 164836 GTGGATTTGG 164845 |||| || || Sbjct 38809 GTGGCTTCGG 38818 >seq808 Length=275957 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||||||||| || || || || ||||| |||||| ||||| |||||||| || Sbjct 155161 GTGAAGACCCTCATCACGAGAGATGAGCTCATTGGAGAAGGTGAGACCAGGCATGAGGCC 155220 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||| | | || | ||| ||||||||||||||| || Sbjct 155221 ACGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGC 155280 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || || | ||||| | ||||||| Sbjct 155281 AGCGAAGGCGACGAGGCGCTGAGCGAAGG 155309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628019564966400