Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq954 219 5e-52 seq808 125 8e-24 >seq954 Length=26895 Score = 219 bits (242), Expect = 5e-52 Identities = 894/1392 (64%), Gaps = 29/1392 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| | ||||| || ||| |||||||| || || ||| |||| ||| Sbjct 25042 CCTCAGCACATGATTATGCGTGTCGCCGTCGGTATTTGGGGCGATGACGTTGAGCGTGTG 24983 Query 104282 TTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | || || ||| | ||||| |||| | | ||| ||||| |||| || |||| Sbjct 24982 ATTGAAACGTACAATCTCATGTCGTCCAAATTTT--TCACACACGCTTCACCCACTCTCT 24925 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 | || || || ||||| | |||| |||| |||||||| | | || ||||| | Sbjct 24924 TTAACGCCGGCACACCCCAAGCCCAGCTGTCTTCGTGCTTCCTCGTAGACATGAAGGATG 24865 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGC 104457 | ||| | || || |||| || || | | || ||||| || ||||| ||| Sbjct 24864 ATAGTATCGAGGGAATTTATGACACCCTGAAGACATG--CGCAATGATTTCAAAAATGGC 24807 Query 104458 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGAC 104517 || || || || | |||| ||| | | |||| || |||| |||||| Sbjct 24806 CGGCGGCATCGGCCTCAACATTCATCGCATTCGTGCCACGGGCTCATATATTGCGGGGAC 24747 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 ||| || ||| | || |||||||| |||||||| || || ||| ||| || | || Sbjct 24746 AAACGGAACATCCAACGGCATTATTCCGATGCTTCGTGTCTTCAACAACACCGCCAGGTA 24687 Query 104578 TGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 || | || | ||| | || ||| | | || |||| |||||||||||||| Sbjct 24686 CGTTGACCAGGGTGGTAATAAGCGCCCCGGAGCCTTTGCCATCTACCTTGAGCCATGGCA 24627 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||| ||| | | |||||| | || | || || || || | || |||| || Sbjct 24626 CGCAGATGTATTCGAGTTCTTGGATCTTCGCAAGAATCACGGCAAGGAAGAGGTTCGAGC 24567 Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 ||| ||||| ||| ||| |||||||| || ||||| |||||||| ||||||| ||| Sbjct 24566 CCGGGATCTTTTCCTCGCACTCTGGATCCCCGATCTTTTCATGAAACGAGTTGAAAAGAA 24507 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 || | ||| | | | || || || || || ||||| || ||||| |||| Sbjct 24506 CGGAGACTGGACCTTGATGTGCCCTAACGAATGC-CCTGGCCTTGCCGATTGTTATGGTG 24448 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGT 104871 ||||||| || ||| | ||| ||||||||| | ||||| | ||| || ||| | Sbjct 24447 AGGAGTTCGAGGCCTTGTACGAAAAGTACGAAAAGGAAGGCC--GCGGTCGCAAGACTCT 24390 Query 104872 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 ||| | ||||| | || || | || | || || || ||||| | || | Sbjct 24389 AAAGGCTCAAAAGCTGTGGTACGCCATCTTGGAGGCACAGACGGAAACTGGAAATCCTTT 24330 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 ||||||||| || ||| ||| |||| ||||| || |||||||| | || ||| Sbjct 24329 CATGCTTTATAAGGACCACTGCAACCGCAAGAGCAACCAAAAGAACCTAGGCACTATCCG 24270 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || |||||||||||||| || ||| | || | | | | |||||| ||| || || Sbjct 24269 CAGCTCCAATCTCTGTACCGAGATCGTCGAGTATTCGGCTCCGGATGAGGTGGCGGTCTG 24210 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTGAT 105109 ||| | ||||| | || | ||| || || || | | | |||||| | | || Sbjct 24209 CAACTTGGCATCGCTTGCCTTGCCCTCGTTCGTCGA-CTACA-ACAAAGGCGAGTACGAC 24152 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | || |||||||||||||| || || || |||||| || | | || ||| Sbjct 24151 TTCGAGAAACTCCACGAAGTGACCAAGGTCGTGGTTCGAAACCTCAATAAGATCATCGAT 24092 Query 105170 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229 || | ||||| || | || || || |||||| | ||||| || |||||| Sbjct 24091 GTCAACTACTACCCGGTGCAAGAGGCCCGCAACAGCAATATGCGCCACCGGCCCATTGGT 24032 Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGA 105288 | || || ||||| | ||||||| ||| || | || ||| | || || ||| Sbjct 24031 GTAGGCGTGCAGGGCTTAGCGGATGCCTTCCTTGCCCTG-CGCATGCCCTTCGAATCCCC 23973 Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348 || ||| | | |||| | || |||||||| || || || |||||||| || || Sbjct 23972 TGAGGCGCGGCAGCTCAACATCCAAATCTTTGAGACAATCTACCATGCCGCTCTGGAAGC 23913 Query 105349 GAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 | ||| ||| | | ||| | || || || || | ||||| ||||| | Sbjct 23912 G---TCAATGGAGATCTCCAAGGAGCAGGGCCCTTACTCGACATACGAGGGCTCTCCTGT 23856 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTG 105465 || ||||| | || || || || |||||| | | | || || | | | |||| Sbjct 23855 CTCTCAAGGAATTCTCCAGTTCGACATGTGGAATGTTAAGCCCTCGGACCTGTGGAACTG 23796 Query 105466 GGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525 ||| ||||| ||||| | |||||| || | || | |||||||| ||| | | || || Sbjct 23795 GGATGCTCTGAAGGAGCAGATCAAGCAGCATGGCGTCCGTAACAGCCTCTTGTTAGCCCC 23736 Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585 ||||| || || || | ||||| | || || || |||||||||||||| ||||| Sbjct 23735 CATGCCCACTGCAAGTACATCTCAAATTCTCGGGAACAACGAATGCTTTGAACCATACAC 23676 Query 105586 GACGAACATCTA 105597 ||||||| || Sbjct 23675 CTCGAACATTTA 23664 >seq808 Length=275957 Score = 125 bits (138), Expect = 8e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||| ||| |||| ||| |||| || || || ||||||||||||||| ||| ||| Sbjct 155309 CCTTCGCTCAGCGCCTCGTCGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCT 155250 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 | | | |||| |||||||||||||| || |||||||| |||||| ||||||||| | Sbjct 155249 TTGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACCTTCTCCAATG 155190 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||| ||||||||||| ||||| || ||| Sbjct 155189 AGCTCATCTCTCGTGATGAGGGTCTTCAC 155161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583249251436160