Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq910 168 2e-36 seq920 140 1e-27 seq2 113 1e-19 seq1363 96.9 1e-14 >seq910 Length=30028 Score = 168 bits (186), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || || || ||||| || ||||| || ||||| Sbjct 19926 CATACCACCACGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATC 19867 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||||||||| || || ||||||||||| |||||||| ||||| || Sbjct 19866 AGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGG 19807 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | || || || || || | || |||| ||| Sbjct 19806 AGGAATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTC 19747 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || |||| ||||| || || || || || || || |||||||| Sbjct 19746 AACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 19696 Score = 161 bits (178), Expect = 3e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || |||||||| || || ||||| || || || || |||||||| Sbjct 20150 CCACCACGAAGGCGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAA 20091 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || ||||| ||||| || || ||||| || || ||||| |||||||| || ||| Sbjct 20090 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 20031 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 |||||||| || |||||||| || | || ||||| || || | ||| || | |||||| Sbjct 20030 ATTCCTTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACC 19971 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || |||| ||||| || || || || || ||||| |||||||| Sbjct 19970 TCGAGCGTAATAGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19924 Score = 131 bits (144), Expect = 5e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||||||||| ||||||||||| || |||||||| || || Sbjct 19390 CATACCACCACGAAGGCGGAGAACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTC 19331 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || || || ||||| || |||||||| || || || || ||||| || || Sbjct 19330 AGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGG 19271 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || |||||||| || | || || || || || | |||||| | || Sbjct 19270 GGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTATCAGAGGACTC 19211 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTT 140721 || || | || | ||||| ||||| | | ||| Sbjct 19210 GACCTCCAAAGTGATGGTCTTGCCGGTAACTATTT 19176 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||||||||| ||||||||||| || || ||||| || || Sbjct 19698 CATACCACCACGGAGACGGAGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTC 19639 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || || || || || | ||||| || ||||| Sbjct 19638 CGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGG 19579 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | || ||||| || || | || || | || Sbjct 19578 AGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTC 19519 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || |||| ||||| ||||| || || || || Sbjct 19518 GACCTCGAGGGTAATGGTCTTGCCGGTAAGGGTCTTGAC 19480 >seq920 Length=150670 Score = 140 bits (154), Expect = 1e-27 Identities = 467/724 (65%), Gaps = 2/724 (0%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || || || || || ||||| || || || | |||||| || || || || || Sbjct 147889 GCCGTCATCACGGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCC 147948 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || |||||||| || || || ||| Sbjct 147949 GGTCTCATTGCCGGTCTCAACGTCCTCCGTATCATCAACGAACCCACCGCCGCTGCCATT 148008 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || ||||| || | | || || || | || ||||| ||| | || Sbjct 148009 GCCTACGGTCTTGACAAGAAGCACGAGGGTGAGCGCAACGTCCTCATTTTCGATCTTGGC 148068 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || || |||| || || || || || || || || Sbjct 148069 GGTGGTACTTTCGATGTCTCCCTCCTCACCATTGAGGATGGTATCTTCGAGGTCAAGGCT 148128 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || |||||||| || || |||||||| |||||| | || || || || || ||| || Sbjct 148129 ACCGCTGGTGACACTCACCTTGGTGGTGAAGATATGGACAACCGCCTGGTGCAGCACTTC 148188 Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 | || || || |||||| |||| || | || | || | | || | || Sbjct 148189 ATCAACGAGTTCAAGCGT-AAGCACAAGAAGGACCTCTCCTCCAACGCCCGCGCTCTCCG 148247 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 ||||| | ||||| || || ||||| ||||| || | || || || |||| ||||| Sbjct 148248 CCGCCTCCGCACTGCTTGCGAGCGTGCCAAGCGAACCCTCTCTTCGTCTGCCCAGACCTC 148307 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 || || ||||| ||||| || || | || |||| | || || || ||||| || Sbjct 148308 CATCGAGATTGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCCCG 148367 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148 || || || | || ||| || || || | || | | || || || || | Sbjct 148368 TTTCGAGGAGCTCTGCCAGGACCTCTTCCGATCCACCCTTCAGCCCGTCGACCGCGTCCT 148427 Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208 || || || || ||| ||| | | || | || | || |||||||| || Sbjct 148428 TTCCGACGCCAAGATCGACAAGTCCCAGGTCCACGACATCGTCCTCGTCGGTGGTTCCAC 148487 Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAG 350268 ||||| || || || || | | || || | || || ||||| ||||| | Sbjct 148488 CCGTATCCCCCGTGTCCAGAAGCTCATCTCGGACTACTTCAACGGCAAGGAACCCAACAA 148547 Query 350269 ATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATC 350328 || || || || ||||| |||||||| || |||||||| || ||||| | ||| | || Sbjct 148548 GTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCCGCCATTCTTTC 148607 Query 350329 TGGA 350332 ||| Sbjct 148608 CGGA 148611 >seq2 Length=228398 Score = 113 bits (124), Expect = 1e-19 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || |||||||| |||||||| | || || ||||| || || || ||||| || || || Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| ||||| || || || ||||| || ||||||||||| || | || ||||| || Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 |||| || || | || || ||||| || | ||||| || || || || || |||||| Sbjct 5469 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAA 5410 >seq1363 Length=241506 Score = 96.9 bits (106), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 ||||||||||| ||| || ||| || || | ||||||||||| |||||||| || Sbjct 84778 CGTGGCACACCCAATGTGACGTTC---TTGGAAGATACACCAGCAAAATGGAAAGTGTTG 84722 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||||| | ||||| ||||| |||||||| || | ||| ||||||||||| Sbjct 84721 AGTGTCATCTGAGTGGCAGGCTCTCCAATGGACTGCGCAGCCAAAACACCAACCATTTCA 84662 Query 377578 CCAGGATTGACAATAGCCT 377596 ||||| || || | |||| Sbjct 84661 CCAGGGTTAACGAATGCCT 84643 Score = 84.2 bits (92), Expect = 7e-11 Identities = 215/323 (67%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 378127 CCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTCATATCA 378186 ||||| ||||| ||| ||| || || || | | | | ||||| || ||| |||| Sbjct 84088 CCATCCTCTCCGTATAGGAACTGGACGATATCACCCAGAGAGTTTCGGACGGTCCCATCA 84029 Query 378187 TATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTT-G 378245 || | || | | ||||| | || || | || || || || ||||| || | | Sbjct 84028 TACTTCACGCTAACGTCTTCAAGCGCCTTCACGAGACGACGTTGGATGTAACCTGTCTCG 83969 Query 378246 ACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAA 378305 || || |||||||||||||| || | ||| | | |||| |||| || |||||||| || Sbjct 83968 GCT-GTCTTAACTGCAGTATCGATGAGACCTTCTCTACCAGCCATGGCGTGGAAGAAGAA 83910 Query 378306 TTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCT--GGC 378363 || || || ||||| |||| | | || |||| | || || | |||||| || Sbjct 83909 CTCGGTTGGCGTAAGACCACGGAGGTAAGAGTTCTCGACGAACCCAC--GCGCCTCGGGG 83852 Query 378364 GAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGT 378423 || | ||||| || || |||| |||| || || | || || || | ||||| || Sbjct 83851 GAGTAATCATCCTTGGTGAAATGGGGTAGGGTTCGGTACTTGAATCCGAAAGGAATACGC 83792 Query 378424 TTTCCATCAACATTCTGTTGACC 378446 ||||| ||||| |||| || || Sbjct 83791 TTTCCTTCAACGATCTGCTGGCC 83769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515223647911952