Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq954 167 3e-36 seq808 91.5 2e-13 >seq954 Length=26895 Score = 167 bits (184), Expect = 3e-36 Identities = 396/591 (67%), Gaps = 8/591 (1%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| |||||| | ||||| || || ||| |||||| ||| |||||| | Sbjct 25027 ATGCGTGTCGCCGTCGGTATTTGGGGCGATGACGTTGAGCGTGTGATTGAAACGTACAAT 24968 Query 53255 TTAATGA-GCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313 | ||| | | ||| | || || ||||| | || || || || ||||| || || Sbjct 24967 CTCATGTCGTCCAAATTT-TTCACACACGCTTCACCCACTCTCTTTAACGCCGGCACACC 24909 Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373 || | ||| |||| |||||||| || | ||||||||||| ||||| || || Sbjct 24908 CCAAGCCCAGCTGTCTTCGTGCTTCCTCGTAGACATGAAGGATGATAGTATCGAGGGAAT 24849 Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCA 53433 || || || || ||| || || || || || | | || || ||||| || | Sbjct 24848 TTATGACACCCTGAAGACATGCGCAATGATTTCAAAAATGGCCGGCGGCATCGGCCTCAA 24789 Query 53434 C--TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491 | | ||| | | ||||| | ||| || || |||||| ||||| || | Sbjct 24788 CATTCATCGCA--TTCGTGCCACGGGCTCATATATTGCGGGGACAAACGGAACATCCAAC 24731 Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || || | || ||||| || |||||||||||||| ||| ||||||| ||||||||||| Sbjct 24730 GGCATTATTCCGATGCTTCGTGTCTTCAACAACACCGCCAGGTACGTTGACCAGGGTGGT 24671 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 |||||| || | || ||||||||||| ||||| |||||||| || | | ||| Sbjct 24670 AATAAGCGCCCCGGAGCCTTTGCCATCTACCTTGAGCCATGGCACGCAGATGTATTCGAG 24611 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACA 53671 || | || || || |||||| || | |||||| | || ||| || || || Sbjct 24610 TTCTTGGATCTTCGCAAGAATCACGGCAAGGAAGAGGTTCGAGCCCGGGATCTTTTCCTC 24551 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || ||||| || || || |||||| || || || ||| ||| || ||| | || Sbjct 24550 GCACTCTGGATCCCCGATCTTTTCATGAAACGAGTTGAAAAGAACGGAGACTGGACCTTG 24491 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTT 53781 |||||||| ||||| ||||| ||||| | | ||| || ||||||||||| Sbjct 24490 ATGTGCCCTAACGAATGCCCTGGCCTTGCCGATTGT-TATGGTGAGGAGTT 24441 >seq808 Length=275957 Score = 91.5 bits (100), Expect = 2e-13 Identities = 309/469 (66%), Gaps = 37/469 (8%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || ||||| || ||||| || || ||||||||||| || | | |||||||||||||| Sbjct 154862 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 154921 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTC----CCCAAACTGTGCCATG-A 74577 ||||||| ||||| | | | ||| || |||||| || | | | | || | | Sbjct 154922 AAGTCGAAGGGGTTGGTGGACCTGTAGAT---CTTCTCATTGCCGAGA--GCGACAAGTA 154976 Query 74578 GGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTT 74637 | | || || || || | |||||||||| |||| ||| | |||||||| || Sbjct 154977 GCCTGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTCGCGTTCATGCCGAGCAGGG 155036 Query 74638 TGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCT 74697 ||| || || ||||| |||| ||||| ||| | || | || || || | Sbjct 155037 CGCAAGGGAGAGCCTCAGTGAGGAACTCCTGCTCGATCTTGACGGC--ATCGGTAA---- 155090 Query 74698 TGTGAATGTCTTTGGAAGGGCA-CTTTTC---------CCTCAGGTGAGAGTA-AAGCGT 74746 ||| |||| ||| | | || ||| || | | || || ||| | ||| | Sbjct 155091 --TGA-TGTCCTTG-ATGAGCTGCTTGTCGGGGCGGTGCTTGAGATGCGAGAACAAGAGA 155146 Query 74747 CACGGCAAACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAA 74804 |||| | || || | || || || ||||| | || | ||||| || || | Sbjct 155147 CACG-CGAAGTC--GGTGTGAAGACCCTCATCACGAGAGATGAGCTCATTGGAGAAGGTG 155203 Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 || |||||||| || ||||||||||| | ||| || |||| |||| ||| |||||| Sbjct 155204 AGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAG 155263 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTG 74913 ||||| || ||||| || |||||||| ||||| || ||||| |||| Sbjct 155264 AAGATACCCTCGACGGCAGCGAAGGCGACGAGGCGCTGAGCGAA-GGTG 155311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547205165123200