Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq954 214 2e-50 seq910 203 4e-47 seq1408 158 1e-33 seq2 141 1e-28 >seq954 Length=26895 Score = 214 bits (236), Expect = 2e-50 Identities = 882/1377 (64%), Gaps = 32/1377 (2%) Strand=Plus/Plus Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454 ||||| || ||||| |||||||| ||||| || |||| || || || || ||||| Sbjct 23676 GTGTATGGTTCAAAGCATTCGTTGTTCCCGAGAATTTGAGATGTACTTGCAGTGGGCATG 23735 Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGAC 80514 ||| | | ||| || || || | ||| |||| |||||| | ||| || | | | Sbjct 23736 GGGGCTAACAAGAGGCTGTTACGGACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATCC 23795 Query 80515 CAAAAATCAAC----CCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCC 80568 || || || || | ||| | || |||||||||| ||| | || || | Sbjct 23796 CAGT--TCCACAGGTCCGAGGGCT-TAACATTCCACATGTCGAACTGGAGAATTCCTTGA 23852 Query 80569 GACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGAC 80628 || | ||||| ||| || | ||| ||| ||||||| | ||||| | ||| ||| Sbjct 23853 GAGACAGGAGAGCCCTCGTATGTCGAGTAAGGGCCCTGCTCCTTGGAGATCTCCATTGAC 23912 Query 80629 TCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGT 80688 | || || || || || || |||||||| |||| | ||||||| Sbjct 23913 GCTTCCAGAGCGGCATGGTAGATTGTCTCAAAGATTTGGATGTTGAGCTGCCGCGCCTCA 23972 Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748 ||| ||||| | || || || | ||| | || || | |||||| ||||| | Sbjct 23973 GGGGATTCGAAGGGCATGCGCAGGGCAAGGAAGGCATCCGCTAAGCCCTGCACGCCTACA 24032 Query 80749 GCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATT 80807 | || || ||||||||| | || | | || |||||| | | ||||| |||| Sbjct 24033 CCAATGGGCCGGTGGCGCATATTGCTGTTGCG-GGCCTCTTGCACCGGGTAGTAGTTGAC 24091 Query 80808 ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAA 80867 |||||||| || ||||| || || ||| || || || || ||||||| || Sbjct 24092 ATCGATGATCTTATTGAGGTTTCGAACCACGACCTTGGTCACTTCGTGGAGTTTCTCGAA 24151 Query 80868 GTCGAA------TTGGTTCCCCTTCACAAATGCCGG-AAGGCTCAGGGACGCCAGATTGC 80920 |||| | || ||| | || || | || ||||| || || |||| |||| Sbjct 24152 GTCGTACTCGCCTTTGTTGTAGTCGACGAACGAGGGCAAGGCA-AGCGATGCCAAGTTGC 24210 Query 80921 ACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACT 80980 | || |||||||| || | | | | | |||||||||| || || || | ||| || Sbjct 24211 AGACCGCCACCTCATCCGGAGCCGAATACTCGACGATCTCGGTACAGAGATTGGAGCTGC 24270 Query 80981 TAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGT 81040 || || || ||||| || ||||| |||| |||||| |||||| || |||| Sbjct 24271 GGATAGTGCCTAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTATAAAGCATGA 24330 Query 81041 ACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGA 81100 | || | || || || ||||| || | |||||||| ||| | || | ||||| | Sbjct 24331 AAGGATTTCCAGTTTCCGTCTGTGCCTCCAAGATGGCGTACCACAGCTTTTGAGCCTTTA 24390 Query 81101 CCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCAC 81160 |||||| |||||| | ||||| |||| | ||||||| ||| Sbjct 24391 GAGTCTTGCGACCGCGGCCTTCCTTTTCGTACTTTTCGTACAAGGCCTCGAACTCCTCAC 24450 Query 81161 CGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGT 81220 | | | || | ||| | ||||| |||||||||||||||| | |||||| || | Sbjct 24451 CATAACAATCGGCAAGGCCAGGGCATTCGTTAGGGCACATCAAGGTCCAGTCTCCGTTCT 24510 Query 81221 TCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGC 81280 | || || ||||||||| || ||||||||||| ||| ||| || || ||| | Sbjct 24511 TTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGCGAGGAAAAGATCCCGGGCTC 24570 Query 81281 GCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCC 81340 | |||| || | || || || ||| | || | || || | | || || |||| Sbjct 24571 GAACCTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAACTCGAATACATCTGCGTGCC 24630 Query 81341 ATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAAC 81397 ||||||| || || | ||| | | || ||| | |||||||||| ||||| | Sbjct 24631 ATGGCTCAAGGTAGATGGCAAAGGCTCCGGGGCGCTTATTACCACCCTGGTCAACGTACC 24690 Query 81398 GGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTAC 81457 ||| || ||| || ||||| | ||| || || || || | || ||||| || | Sbjct 24691 TGGCGGTGTTGTTGAAGACACGAAGCATCGGAATAATGCCGTTGGATGTTCCGTTTGTCC 24750 Query 81458 CCACGATACGCGACCCCTTGGCGCGCACCTTGC--TGATTG-AAAGACCGATGCCACCTG 81514 || | ||| || ||| |||| || | ||| ||| || || |||||||| || | Sbjct 24751 CCGCAATATATGAGCCCGTGGCACGAA---TGCGATGAATGTTGAGGCCGATGCCGCCGG 24807 Query 81515 ACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTT 81574 | ||||||||| || || |||| ||| ||||||||||||||||| ||||| | Sbjct 24808 CCATTTTTGAAATCATTGCGCATGTCTTCAGGGTGTCATAAATTCCCTCGATACTATCAT 24867 Query 81575 TTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTT--TTTGAGCCGGCATTGAA 81632 |||||||| | | ||| || |||| || |||||| || |||||| || || Sbjct 24868 CCTTCATGTCTACGAGGAAGCACGAAGACAGCT--GGGCTTGGGGTGTGCCGGCGTTAAA 24925 Query 81633 CAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGAC 81692 || || || | ||||| ||||| | | ||||| || | || ||||| | || Sbjct 24926 GAGAGTGGGTGAAGCGTGTGTGAAAAATTTGGACGACATGAGATTGTACGTTTCAATCAC 24985 Query 81693 GCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 || || || || || |||||||| || |||||||||| ||||| ||| || Sbjct 24986 ACGCTCAACGTCATCGCCCCAAATACCGACGGCGACACGCATAATCATGTGCTGAGG 25042 >seq910 Length=30028 Score = 203 bits (224), Expect = 4e-47 Identities = 183/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| |||||||||||||| || |||||||| || Sbjct 19924 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAGACTATTACGCTCGAGGTTGAATCTTCG 19983 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| ||||| | || |||||||||||||| |||||||| || || ||| Sbjct 19984 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGAATTCCCCCCGATCAG 20043 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| ||||| ||||| || ||||||| ||| || || | || || || Sbjct 20044 CAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTTTCTGATTACAAC 20103 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||| || ||||| ||| | || ||||| ||||| || Sbjct 20104 ATCCAGAAGGAGTCCACACTCCATCTTGTCCTCCGCCTTCGTGGTGGCCA 20153 Score = 167 bits (184), Expect = 3e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| |||||||||||||| ||||| || ||||| ||||| || | ||| | Sbjct 19480 GTCAAGACCCTTACCGGCAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACCATCGAC 19539 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || || |||||||||||||| |||||||| ||||| || || | ||| Sbjct 19540 AATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATT 19599 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| |||||||||| || ||||| | ||||| ||| |||| ||||| Sbjct 19600 TTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAATATCCAGAAGGAG 19659 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||| ||||| || | ||||| || ||||| Sbjct 19660 TCTACTCTCCATCTTGTTCTCCGTCTCCGTGGTGG 19694 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| ||||| |||||||| ||||| || || ||||| ||| Sbjct 19696 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 19755 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||| | || || |||||||||||||| |||||||| || || Sbjct 19756 GACACCATCGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 19815 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || |||||||||||||| || || |||| || ||||| | || || || Sbjct 19816 CAACGTCTCATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCTGATTACAAC 19875 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| || || || ||| | |||||||| ||||| Sbjct 19876 ATTCAGAAGGAGTCCACCCTCCACCTTGTCCTCCGTCTTCGTGGTGG 19922 Score = 149 bits (164), Expect = 7e-31 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487 ||||||||||||| || ||| | ||||| ||||| ||||| || | || | ||| Sbjct 19182 TTACCGGCAAGACCATCACTTTGGAGGTCGAGTCCTCTGATACTATCGACAACGTCAAGT 19241 Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547 | || ||||||||||||||||| || || || ||||||||||| || ||||| ||||| | Sbjct 19242 CGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATTTTCGCTGGAA 19301 Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607 |||| || ||||| | || ||||| | ||||| ||| | || ||||| || ||||| | Sbjct 19302 AGCAGCTTGAGGACGGCCGCACCCTCTCTGACTACAATATTCAGAAGGAGTCTACTCTCC 19361 Query 27608 ATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || | || ||||| ||||| Sbjct 19362 ATCTTGTTCTCCGCCTTCGTGGTGG 19386 >seq1408 Length=106487 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || || || || ||||| || ||||| ||||| Sbjct 91271 ATGCAAATCTTCGTCAAGACCCTAACGGGTAAAACCATTACCCTCGAGGTCGAGTCCTCG 91212 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || |||||||||||||| || || || |||||| Sbjct 91211 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 91152 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| | ||||| || Sbjct 91151 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 91092 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | ||||||||||| || Sbjct 91091 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTTCGCGGCGG 91045 >seq2 Length=228398 Score = 141 bits (156), Expect = 1e-28 Identities = 140/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 ||||||||||| || || |||||||| || || |||||||| ||||| || | || Sbjct 5411 TTTGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 5470 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| ||||| | || |||||||| ||||||||||| || || |||||||||||||| Sbjct 5471 GACAATGTGAAGTCCAAGATTCAGGATAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTT 5530 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 ||||| || || ||||| |||||||||| || ||||| | || || ||| | || ||| Sbjct 5531 ATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAAG 5590 Query 27595 G 27595 | Sbjct 5591 G 5591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570299107854080