Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq113 104 2e-17 >seq113 Length=223936 Score = 104 bits (114), Expect = 2e-17 Identities = 196/288 (68%), Gaps = 3/288 (1%) Strand=Plus/Plus Query 29758 ATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29817 ||| ||||| || |||| || ||||||||||||| | |||| | |||| || | Sbjct 124780 ATGTGGGTCATAGCCCTTCACCACAAAATCCTCTGCCTGCCATCCGTCAATGCTCCCCCC 124839 Query 29818 ---CCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29874 | ||| | ||| ||||| || ||| | ||||| | || ||||| | | | Sbjct 124840 TTTCTCCCTCGTAATCTCGAGTGTCGGGAAGTCGCGTGGCTCGCGTTCTAGCTGCGACCT 124899 Query 29875 CAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCC 29934 ||| | || |||| || || || ||||| |||||||||| | ||| |||| ||| Sbjct 124900 CAGAGCATCGACGTGGTCTAGATATACGTGGGCGTCTCCCAAGACGTGCGTAAACGTTCC 124959 Query 29935 CGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTT 29994 || | || || ||| || || ||||| | || | | | |||||| |||||||| Sbjct 124960 TGGGACCAGGTCGCAGACATGCGCGATCATATGTGTTAATAAGGCGTAGCTAGCGATGTT 125019 Query 29995 AAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 ||||| ||||| || |||||||| | || |||||||| ||||| || Sbjct 125020 GAAGGGAACCCCAAGGCCCATGTCGCAAGATCTCTGGTACAGCTGGCA 125067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406302556177728