Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq910 203 8e-47 seq1408 161 2e-34 >seq910 Length=30028 Score = 203 bits (224), Expect = 8e-47 Identities = 178/222 (80%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||||||||| || |||||||| || || ||||| ||||| | |||||| Sbjct 19917 ACGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGT 19858 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| |||||||| || || ||||| || |||||||| || ||||||| || Sbjct 19857 GCGGCCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACC 19798 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| |||||||| ||||||||||| || |||||| ||||| Sbjct 19797 CTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAACTTCGAG 19738 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| || || |||||||| || || | |||||| Sbjct 19737 GGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 19696 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | |||||||| || || |||||||| || |||||||| ||||| | ||| || Sbjct 20145 ACGAAGGCGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGT 20086 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| ||||| || || || || || || || |||| ||| Sbjct 20085 GCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCC 20026 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||| ||||| ||||| || |||||||| || || |||||||||||| Sbjct 20025 TTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAG 19966 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || || ||||| ||||| | |||||| Sbjct 19965 CGTAATAGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19924 Score = 158 bits (174), Expect = 3e-33 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || ||||| ||||| || ||||| || || |||| ||||| | ||||| Sbjct 19679 AGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCATCC 19620 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || | ||||||||||||||||||| || ||||||||| Sbjct 19619 TCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCC 19560 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| || || |||||||| || || ||| Sbjct 19559 TGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTC 19500 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || || ||||| || Sbjct 19499 TTGCCGGTAAGGGTCTTGAC 19480 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| || ||||| ||||| || || || || || || | ||||| Sbjct 19381 ACGAAGGCGGAGAACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGT 19322 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || |||||||| || ||||| || ||||| || ||||| || || | || Sbjct 19321 GCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCC 19262 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| || ||||| ||||| || |||||| || ||||| | Sbjct 19261 CTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTATCAGAGGACTCGACCTCCAA 19202 Query 211073 AGTGATCGTCTTTCCCGT 211090 |||||| ||||| || || Sbjct 19201 AGTGATGGTCTTGCCGGT 19184 >seq1408 Length=106487 Score = 161 bits (178), Expect = 2e-34 Identities = 170/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| ||||| || |||||||| || |||||||| || || | ||||| Sbjct 91051 CGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 91110 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || ||||||||||| |||||||| ||||| || |||||||| || | || Sbjct 91111 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCC 91170 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| || || || ||||| ||||| ||| || |||||||| Sbjct 91171 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGG 91230 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || ||||| || ||||| || || | ||||| || Sbjct 91231 GTAATGGTTTTACCCGTTAGGGTCTTGACGAAGATTTGCATGTT 91274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159128475010160